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错配修复缺陷的大肠杆菌菌株中自发突变的光谱:体内DNA复制错误的本质

Spectra of spontaneous mutations in Escherichia coli strains defective in mismatch correction: the nature of in vivo DNA replication errors.

作者信息

Schaaper R M, Dunn R L

出版信息

Proc Natl Acad Sci U S A. 1987 Sep;84(17):6220-4. doi: 10.1073/pnas.84.17.6220.

DOI:10.1073/pnas.84.17.6220
PMID:3306672
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC299042/
Abstract

We have determined the DNA sequence changes in 487 spontaneous mutations in the N-terminal part of the lacI gene in mutH, mutL, and mutS strains of Escherichia coli. These strains display elevated spontaneous mutation rates because of a deficiency in the process of postreplicative mismatch correction. As a consequence the mutational spectra reveal the nature of spontaneous DNA replication errors. The spectra consist of base substitutions (75%) and single-base deletions (25%). Among the base substitutions, transitions (both A.T----G.C and G.C----A.T) are strongly favored over transversions (96% versus 4%). Large site-to-site differences are observed among identical base substitutions, presumably reflecting the modulating effects of neighboring bases. The single-base-deletion spectrum is dominated by a large hotspot at a run of adjacent identical base pairs, implying a Streisinger-slippage mechanism. The data, when compared to a previously determined wild-type spectrum, also provide information on the specificity of the mismatch repair system.

摘要

我们已经确定了大肠杆菌mutH、mutL和mutS菌株中lacI基因N端487个自发突变的DNA序列变化。由于复制后错配修复过程存在缺陷,这些菌株表现出自发突变率升高。因此,突变谱揭示了自发DNA复制错误的本质。该谱由碱基替换(75%)和单碱基缺失(25%)组成。在碱基替换中,转换(A.T→G.C和G.C→A.T)比颠换更受青睐(96%对4%)。在相同的碱基替换中观察到较大的位点间差异,这可能反映了相邻碱基的调节作用。单碱基缺失谱主要由一段相邻相同碱基对处的一个大热点主导,这意味着存在斯特赖辛格滑动机制。与先前确定的野生型谱相比,这些数据还提供了错配修复系统特异性的信息。

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