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魏氏宽盾蝽线粒体基因组中的新型 tRNA 基因重排。

Novel tRNA gene rearrangements in the mitochondrial genome of Camarochiloides weiweii (Hemiptera: Pachynomidae).

机构信息

Department of Entomology and MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing 100193, China.

Department of Entomology and MOA Key Lab of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing 100193, China.

出版信息

Int J Biol Macromol. 2020 Dec 15;165(Pt B):1738-1744. doi: 10.1016/j.ijbiomac.2020.10.051. Epub 2020 Oct 16.

Abstract

Pachynomidae is a poorly known heteropteran group currently considered as a distinct family closely related to Reduviidae. Taxonomic position of Pachynomidae has been debated for a long time. Knowledge about mitochondrial genome (mitogenome) of this family also remain limited. In the present study, we describe the complete mitogenome of Camarochiloides weiweii, the first mitogenome sequenced for this family. This mitogenome consists of 13 protein-coding genes, two rRNA genes and 21 tRNA genes. Two tRNA gene rearrangements in this genome, including the translocation of trnA and trnR as well as the transposition of trnH, were observed and could be explained by the tandem duplication-random loss (TDRL) model. Bayesian and maximum likelihood analyses based on sequences of three different mitogenomic datasets recovered the monophyly of Reduvioidea, and the sister relationship between Reduvioidea and the remaining Cimicomorpha lineages. This study enlightens the future application of mitogenomic data in the phylogenetic study of Cimicomorpha based on the large-scale sampling.

摘要

猎蝽科是一个鲜为人知的半翅目昆虫群,目前被认为是一个与红蝽科密切相关的独特科。猎蝽科的分类地位长期以来一直存在争议。关于该科的线粒体基因组(线粒体基因组)的知识也仍然有限。在本研究中,我们描述了 Camarochiloides weiweii 的完整线粒体基因组,这是该科第一个测序的线粒体基因组。这个线粒体基因组由 13 个蛋白质编码基因、两个 rRNA 基因和 21 个 tRNA 基因组成。在这个基因组中观察到两个 tRNA 基因重排,包括 trnA 和 trnR 的易位以及 trnH 的转位,这可以用串联重复-随机丢失(TDRL)模型来解释。基于三个不同的线粒体基因组数据集的序列进行的贝叶斯和最大似然分析恢复了红蝽目(Reduvioidea)的单系性,以及红蝽目与剩余的 Cimicomorpha 谱系之间的姐妹关系。这项研究为基于大规模采样的 Cimicomorpha 系统发育研究中利用线粒体基因组数据提供了启示。

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