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螳螂(网翅目,螳螂科)的线粒体基因组:tRNA基因的重排、重复和重新分配

Mitochondrial genomes of praying mantises (Dictyoptera, Mantodea): rearrangement, duplication, and reassignment of tRNA genes.

作者信息

Ye Fei, Lan Xu-E, Zhu Wen-Bo, You Ping

机构信息

Co-Innovation Center for Qinba Regions' Sustainable Development, College of Life Science, Shaanxi Normal University, Xi'an, 710062, China.

出版信息

Sci Rep. 2016 May 9;6:25634. doi: 10.1038/srep25634.

Abstract

Insect mitochondrial genomes (mitogenomes) contain a conserved set of 37 genes for an extensive diversity of lineages. Previously reported dictyopteran mitogenomes share this conserved mitochondrial gene arrangement, although surprisingly little is known about the mitogenome of Mantodea. We sequenced eight mantodean mitogenomes including the first representatives of two families: Hymenopodidae and Liturgusidae. Only two of these genomes retain the typical insect gene arrangement. In three Liturgusidae species, the trnM genes have translocated. Four species of mantis (Creobroter gemmata, Mantis religiosa, Statilia sp., and Theopompa sp.-HN) have multiple identical tandem duplication of trnR, and Statilia sp. additionally includes five extra duplicate trnW. These extra trnR and trnW in Statilia sp. are erratically arranged and form another novel gene order. Interestingly, the extra trnW is converted from trnR by the process of point mutation at anticodon, which is the first case of tRNA reassignment for an insect. Furthermore, no significant differences were observed amongst mantodean mitogenomes with variable copies of tRNA according to comparative analysis of codon usage. Combined with phylogenetic analysis, the characteristics of tRNA only possess limited phylogenetic information in this research. Nevertheless, these features of gene rearrangement, duplication, and reassignment provide valuable information toward understanding mitogenome evolution in insects.

摘要

昆虫线粒体基因组(线粒体基因组)包含一组保守的37个基因,适用于广泛多样的谱系。先前报道的网翅目线粒体基因组共享这种保守的线粒体基因排列,尽管令人惊讶的是,关于螳螂目的线粒体基因组知之甚少。我们对八个螳螂目线粒体基因组进行了测序,包括两个科的首个代表:花螳科和叶背螳科。这些基因组中只有两个保留了典型的昆虫基因排列。在三个叶背螳科物种中,trnM基因发生了易位。四种螳螂(宝石螳、中华大刀螳、静螳属物种和泰庞螳属物种-HN)具有多个相同的串联重复trnR,并且静螳属物种还额外包含五个重复的trnW。静螳属物种中的这些额外的trnR和trnW排列不规则,形成了另一种新的基因顺序。有趣的是,额外的trnW是通过反密码子处的点突变过程从trnR转换而来的,这是昆虫tRNA重新分配的首例。此外,根据密码子使用的比较分析,在具有可变tRNA拷贝数的螳螂目线粒体基因组之间未观察到显著差异。结合系统发育分析,在本研究中tRNA的特征仅具有有限的系统发育信息。然而,这些基因重排、重复和重新分配的特征为理解昆虫线粒体基因组进化提供了有价值的信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/91d6/4860592/95187ba17013/srep25634-f1.jpg

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