Arista Romeu Eduardo J, Rivera Fernández Josué D, Roa Tort Karen, Valor Alma, Escobedo Galileo, Fabila Bustos Diego A, Stolik Suren, de la Rosa José Manuel, Guzmán Carolina
Laboratorio de Biofotónica, ESIME Zac, Instituto Politécnico Nacional, Ciudad de Mexico 07738, Mexico.
Laboratorio de Biofotónica, ESIME Zac, Instituto Politécnico Nacional, Ciudad de Mexico 07738, Mexico.
Comput Methods Programs Biomed. 2021 Jan;198:105777. doi: 10.1016/j.cmpb.2020.105777. Epub 2020 Oct 3.
Due to the existing prevalence of nonalcoholic fatty liver disease (NAFLD) and its relation to the epidemic of obesity in the general population, it is imperative to develop detection and evaluation methods of the early stages of the disease with improved efficacy over the current diagnostic approaches. We aimed to obtain an improved diagnosis, combining methods of optical spectroscopy -diffuse reflectance and fluorescence- with statistical data analysis applied to detect early stages of NAFLD.
Statistical analysis scheme based on quadratic discriminant analysis followed by canonical discriminant analysis were applied to the diffuse reflectance data combined with endogenous fluorescence spectral data excited at one of these wavelengths: 330, 365, 385, 405 or 415 nm. The statistical scheme was also applied to the combinations of fluorescence spectrum (405 nm) with each one of the other fluorescence spectra. Details of the developed software, including the application of machine learning algorithms to the combination of spectral data followed by classification statistical schemes, are discussed.
Steatosis progression was differentiated with little classification error (≤1.3%) by using diffuse reflectance and endogenous fluorescence at different wavelengths. Similar results were obtained using fluorescence at 405 nm and one of the other fluorescence spectra (classification error ≤1.0%). Adding the corresponding areas under the curves to the above combinations of spectra diminished errors to 0.6% and 0.3% or less, respectively. The best results for the compounded reflectance-plus-fluorescence spectra were obtained with fluorescence spectra excited at 415 nm with a total classification error of 0.2%; for the combination of the 405nm-excited fluorescence spectrum with another fluorescence spectrum, the best results were achieved for 385 nm, for which total relative classification error amounted 0.4%. The consideration of the area under the spectral curves further improved both classifiers, reducing the error to 0.0% in both cases.
Spectrometric techniques combined with statistical processing are a promising tool to improve steatosis classification through a label free approach. However, statistical schemes here applied, might result complex for the everyday medical practice, the designed software including machine learning algorithms is able to render automatic classification of samples according to their steatosis grade with low error.
鉴于非酒精性脂肪性肝病(NAFLD)在普通人群中的普遍存在及其与肥胖流行的关系,开发比当前诊断方法更有效的疾病早期检测和评估方法势在必行。我们旨在通过将光学光谱法(漫反射和荧光)与应用于检测NAFLD早期阶段的统计数据分析相结合,实现更准确的诊断。
基于二次判别分析并随后进行典型判别分析的统计分析方案应用于漫反射数据,并结合在330、365、385、405或415nm这些波长之一激发的内源性荧光光谱数据。该统计方案也应用于荧光光谱(405nm)与其他每个荧光光谱的组合。讨论了所开发软件的详细信息,包括将机器学习算法应用于光谱数据组合并随后采用分类统计方案。
通过使用不同波长的漫反射和内源性荧光,脂肪变性进展得以区分,分类误差很小(≤1.3%)。使用405nm荧光和其他荧光光谱之一也获得了类似结果(分类误差≤1.0%)。将曲线下相应面积添加到上述光谱组合中,误差分别降至0.6%和0.3%或更低。复合反射加荧光光谱的最佳结果是在415nm激发的荧光光谱下获得的,总分类误差为0.2%;对于405nm激发的荧光光谱与另一个荧光光谱的组合,385nm时取得最佳结果,总相对分类误差为0.4%。考虑光谱曲线下的面积进一步改进了两个分类器,两种情况下误差均降至0.0%。
光谱技术与统计处理相结合是一种有前途的工具,可通过无标记方法改善脂肪变性分类。然而,这里应用的统计方案对于日常医疗实践可能较为复杂,所设计的包括机器学习算法的软件能够根据样本的脂肪变性等级对其进行自动分类,误差较低。