Smith Derek A, Fike David A, Johnston David T, Bradley Alexander S
Department of Earth and Planetary Sciences, Washington University in St. Louis, St. Louis, MO, United States.
Department of Earth and Planetary Sciences, Harvard University, Cambridge, MA, United States.
Front Microbiol. 2020 Sep 18;11:529317. doi: 10.3389/fmicb.2020.529317. eCollection 2020.
The use of stable isotopes to trace biogeochemical sulfur cycling relies on an understanding of how isotopic fractionation is imposed by metabolic networks. We investigated the effects of the first two enzymatic steps in the dissimilatory sulfate reduction (DSR) network - sulfate permease and sulfate adenylyl transferase (Sat) - on the sulfur and oxygen isotopic composition of residual sulfate. Mutant strains of str. Hildenborough (DvH) with perturbed expression of these enzymes were grown in batch culture, with a subset grown in continuous culture, to examine the impact of these enzymatic steps on growth rate, cell specific sulfate reduction rate and isotopic fractionations in comparison to the wild type strain. Deletion of several permease genes resulted in only small (∼1‰) changes in sulfur isotope fractionation, a difference that approaches the uncertainties of the measurement. Mutants that perturb Sat expression show higher fractionations than the wild type strain. This increase probably relates to an increased material flux between sulfate and APS, allowing an increase in the expressed fractionation of rate-limiting APS reductase. This work illustrates that flux through the initial steps of the DSR pathway can affect the fractionation imposed by the overall pathway, even though these steps are themselves likely to impose only small fractionations.
利用稳定同位素追踪生物地球化学硫循环依赖于对代谢网络如何施加同位素分馏的理解。我们研究了异化硫酸盐还原(DSR)网络中的前两个酶促步骤——硫酸盐通透酶和硫酸腺苷转移酶(Sat)——对残余硫酸盐的硫和氧同位素组成的影响。对这些酶表达受到干扰的希登伯勒菌株(DvH)的突变株进行分批培养,其中一部分进行连续培养,以研究与野生型菌株相比,这些酶促步骤对生长速率、细胞特异性硫酸盐还原速率和同位素分馏的影响。几个通透酶基因的缺失仅导致硫同位素分馏有微小(约1‰)变化,这种差异接近测量的不确定性。干扰Sat表达的突变体显示出比野生型菌株更高的分馏。这种增加可能与硫酸盐和APS之间物质通量增加有关,使得限速APS还原酶的表达分馏增加。这项工作表明,尽管DSR途径的初始步骤本身可能仅施加微小的分馏,但通过这些步骤的通量可以影响整个途径施加的分馏。