CCL2 中和后人单核细胞来源的巨噬细胞转录组谱分析揭示固有免疫途径的激活与 HIV-1 基因表达的限制之间存在关联。
Transcriptome Profiling of Human Monocyte-Derived Macrophages Upon CCL2 Neutralization Reveals an Association Between Activation of Innate Immune Pathways and Restriction of HIV-1 Gene Expression.
机构信息
National Center for Global Health, Istituto Superiore di Sanità, Rome, Italy.
UCLA Section of Oral Biology, Division of Oral Biology & Medicine, Center for Oral and Head/Neck Oncology Research, Center for the Health Sciences, UCLA School of Dentistry, University of California at Los Angeles, Los Angeles, CA, United States.
出版信息
Front Immunol. 2020 Sep 18;11:2129. doi: 10.3389/fimmu.2020.02129. eCollection 2020.
Macrophages are key targets of human immunodeficiency virus type 1 (HIV-1) infection and main producers of the proinflammatory chemokine CC chemokine ligand 2 (CCL2), whose expression is induced by HIV-1 both and . We previously found that CCL2 neutralization in monocyte-derived macrophages (MDMs) strongly inhibited HIV-1 replication affecting post-entry steps of the viral life cycle. Here, we used RNA-sequencing to deeply characterize the cellular factors and pathways modulated by CCL2 blocking in MDMs and involved in HIV-1 replication restriction. We report that exposure to CCL2 neutralizing antibody profoundly affected the MDM transcriptome. Functional annotation clustering of up-regulated genes identified two clusters enriched for antiviral defense and immune response pathways, comprising several interferon-stimulated, and restriction factor coding genes. Transcripts in the clusters were enriched for RELA and NFKB1 targets, suggesting the activation of the canonical nuclear factor κB pathway as part of a regulatory network involving miR-155 up-regulation. Furthermore, while HIV-1 infection caused small changes to the MDM transcriptome, with no evidence of host defense gene expression and type I interferon signature, CCL2 blocking enabled the activation of a strong host innate response in infected macrophage cultures, and potently inhibited viral genes expression. Notably, an inverse correlation was found between levels of viral transcripts and of the restriction factors APOBEC3A (apolipoprotein B mRNA editing enzyme catalytic polypeptide-like 3 A), ISG15, and MX1. These findings highlight an association between activation of innate immune pathways and HIV-1 restriction upon CCL2 blocking and identify this chemokine as an endogenous factor contributing to the defective macrophage response to HIV-1. Therapeutic targeting of CCL2 may thus strengthen host innate immunity and restrict HIV-1 replication.
巨噬细胞是人类免疫缺陷病毒 1 型(HIV-1)感染的关键靶标,也是促炎趋化因子 CC 趋化因子配体 2(CCL2)的主要产生者,其表达受 HIV-1 和 的诱导。我们之前发现,单核细胞衍生的巨噬细胞(MDM)中 CCL2 的中和强烈抑制了 HIV-1 的复制,影响了病毒生命周期的进入后步骤。在这里,我们使用 RNA 测序来深入描述 CCL2 阻断在 MDM 中调节和 HIV-1 复制限制相关的细胞因子和途径。我们报告说,暴露于 CCL2 中和抗体显著影响了 MDM 的转录组。上调基因的功能注释聚类鉴定了两个富含抗病毒防御和免疫反应途径的簇,包含几个干扰素刺激和限制因子编码基因。聚类中的转录物富含 RELA 和 NFKB1 靶标,表明经典核因子 κB 途径的激活是涉及 miR-155 上调的调节网络的一部分。此外,虽然 HIV-1 感染对 MDM 的转录组只有很小的改变,没有宿主防御基因表达和 I 型干扰素特征的证据,但 CCL2 阻断使感染巨噬细胞培养物中激活了强烈的先天宿主反应,并强烈抑制了病毒基因的表达。值得注意的是,在病毒转录本水平和限制因子 APOBEC3A(载脂蛋白 B mRNA 编辑酶催化多肽样 3A)、ISG15 和 MX1 的水平之间发现了反比相关性。这些发现强调了 CCL2 阻断时先天免疫途径的激活与 HIV-1 限制之间的关联,并确定了这种趋化因子是导致巨噬细胞对 HIV-1 反应缺陷的内源性因素。因此,CCL2 的治疗靶向可能会增强宿主先天免疫并限制 HIV-1 的复制。