Division of Medical Genetics, Department of Pediatrics, Duke Health, Durham, NC, USA.
Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
Genet Med. 2021 Feb;23(2):259-271. doi: 10.1038/s41436-020-00984-z. Epub 2020 Oct 23.
The NIH Undiagnosed Diseases Network (UDN) evaluates participants with disorders that have defied diagnosis, applying personalized clinical and genomic evaluations and innovative research. The clinical sites of the UDN are essential to advancing the UDN mission; this study assesses their contributions relative to standard clinical practices.
We analyzed retrospective data from four UDN clinical sites, from July 2015 to September 2019, for diagnoses, new disease gene discoveries and the underlying investigative methods.
Of 791 evaluated individuals, 231 received 240 diagnoses and 17 new disease-gene associations were recognized. Straightforward diagnoses on UDN exome and genome sequencing occurred in 35% (84/240). We considered these tractable in standard clinical practice, although genome sequencing is not yet widely available clinically. The majority (156/240, 65%) required additional UDN-driven investigations, including 90 diagnoses that occurred after prior nondiagnostic exome sequencing and 45 diagnoses (19%) that were nongenetic. The UDN-driven investigations included complementary/supplementary phenotyping, innovative analyses of genomic variants, and collaborative science for functional assays and animal modeling.
Investigations driven by the clinical sites identified diagnostic and research paradigms that surpass standard diagnostic processes. The new diagnoses, disease gene discoveries, and delineation of novel disorders represent a model for genomic medicine and science.
美国国立卫生研究院(NIH)未确诊疾病网络(UDN)评估患有疑难杂症的参与者,应用个性化的临床和基因组评估以及创新研究。UDN 的临床站点对于推进 UDN 的使命至关重要;本研究评估了它们相对于标准临床实践的贡献。
我们分析了 2015 年 7 月至 2019 年 9 月四个 UDN 临床站点的回顾性数据,以评估诊断、新疾病基因发现和潜在的调查方法。
在 791 名接受评估的个体中,231 名获得了 240 种诊断,发现了 17 种新的疾病基因关联。在 UDN 外显子组和基因组测序中,有 35%(84/240)出现了简单的诊断。我们认为这些在标准临床实践中是可行的,尽管基因组测序尚未在临床上广泛应用。大多数(156/240,65%)需要额外的 UDN 驱动的调查,包括 90 个在之前非诊断性外显子组测序后出现的诊断和 45 个(19%)非遗传诊断。UDN 驱动的调查包括互补/补充表型分析、基因组变异的创新分析以及功能测定和动物模型的合作科学。
临床站点驱动的调查确定了超越标准诊断过程的诊断和研究范例。新的诊断、疾病基因发现和新疾病的描述代表了基因组医学和科学的典范。