Division of Food Science and Biotechnology, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan.
Department of Applied Biological Science, Faculty of Agriculture, Kagawa University, Kagawa 761-0795, Japan.
Bioorg Med Chem Lett. 2020 Dec 15;30(24):127657. doi: 10.1016/j.bmcl.2020.127657. Epub 2020 Oct 29.
Debromoaplysiatoxin (DAT) is a potent protein kinase C (PKC) activator with tumor-promoting and pro-inflammatory activities. Irie and colleagues have found that 10-methyl-aplog-1 (1), a simplified analog of DAT, has strong anti-proliferative activity against several cancer cell lines with few adverse effects. Therefore, 1 is a potential lead compound for cancer therapy. We synthesized a new derivative 2 which has a naphthalene ring at the side chain terminal position instead of a benzene ring, to increase CH/π interactions with Pro-241 of the PKCδ-C1B domain. Based on the synthetic route of 1, 2 was convergently synthesized in 26 linear steps from 6-hydroxy-1-naphthoic acid with an overall yield of 0.18%. Although the anti-proliferative activity of 2 was more potent than that of 1, the binding potency of 2 to the PKCδ-C1B domain did not exceed that of 1. Molecular dynamics simulation indicated the capability of 2 to simultaneously form hydrogen bonds and CH/π interactions with the PKCδ-C1B domain. Focusing on the hydrogen bonds, their geometry in the binding modes involving the CH/π interactions seemed to be sub-optimal, which may explain the slightly lower affinity of 2 compared to 1. This study could be of help in optimizing such interactions and synthesizing a promising lead cancer compound.
去溴海兔毒素(DAT)是一种有效的蛋白激酶 C(PKC)激活剂,具有促进肿瘤和促炎作用。Irie 及其同事发现,简化类似物 10-甲基-aplog-1(1)对几种癌细胞系具有很强的抗增殖活性,且副作用较小。因此,1 是癌症治疗的潜在先导化合物。我们合成了一种新的衍生物 2,其侧链末端位置有一个萘环而不是苯环,以增加与 PKCδ-C1B 结构域中 Pro-241 的 CH/π 相互作用。基于 1 的合成路线,2 通过 6-羟基-1-萘甲酸以 26 步线性反应合成,总收率为 0.18%。尽管 2 的抗增殖活性强于 1,但 2 与 PKCδ-C1B 结构域的结合效力并未超过 1。分子动力学模拟表明 2 能够与 PKCδ-C1B 结构域同时形成氢键和 CH/π 相互作用。关注氢键,在涉及 CH/π 相互作用的结合模式中,它们的几何形状似乎不太理想,这可能解释了 2 与 1 相比亲和力略低的原因。这项研究有助于优化这种相互作用并合成有前途的先导癌症化合物。