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人 Fe(II)-结合的酰基辅酶 A 双加氧酶的溶液结构模型及与基质金属蛋白酶 I(MMP-I)的调节域的相互作用。

A Model for the Solution Structure of Human Fe(II)-Bound Acireductone Dioxygenase and Interactions with the Regulatory Domain of Matrix Metalloproteinase I (MMP-I).

机构信息

Department of Chemistry, Brandeis University, 415 South Street, Waltham, Massachusetts 02454-9110, United States.

Department of Biology, Brandeis University, 415 South Street, Waltham, Massachusetts 02454-9110, United States.

出版信息

Biochemistry. 2020 Nov 10;59(44):4238-4249. doi: 10.1021/acs.biochem.0c00724. Epub 2020 Nov 2.

Abstract

The metalloenzyme acireductone dioxygenase (ARD) shows metal-dependent physical and enzymatic activities depending upon the metal bound in the active site. The Fe(II)-bound enzyme catalyzes the penultimate step of the methionine salvage pathway, converting 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one (acireductone) into formate and the ketoacid precursor of methionine, 2-keto-4-thiomethyl-2-oxobutanoate, using O as the oxidant. If Ni(II) is bound, an off-pathway shunt occurs, producing 3-methylthiopropionate, formate, and carbon monoxide from the same acireductone substrate. The solution structure of the Fe(II)-bound human enzyme, HsARD, is described and compared with the structures of Ni-bound forms of the closely related mouse enzyme, MmARD. Potential rationales for the different reactivities of the two isoforms are discussed. The human enzyme has been found to regulate the activity of matrix metalloproteinase I (MMP-I), which is involved in tumor metastasis, by binding the cytoplasmic transmembrane tail peptide of MMP-I. Nuclear magnetic resonance titration of HsARD with the MMP-I tail peptide permits identification of the peptide binding site on HsARD, a cleft anterior to the metal binding site adjacent to a dynamic proline-rich loop.

摘要

金属酶 acireductone 双加氧酶 (ARD) 根据活性位点中结合的金属表现出依赖于金属的物理和酶促活性。Fe(II)结合的酶催化蛋氨酸补救途径的倒数第二步,将 1,2-二羟基-5-(甲硫基)戊-1-烯-3-酮(acireductone)转化为甲酸盐和蛋氨酸的酮酸前体,2-酮-4-甲硫基-2-氧代丁酸盐,使用 O 作为氧化剂。如果结合的是 Ni(II),则会发生偏离途径的支路反应,从相同的 acireductone 底物中产生 3-甲基硫代丙酸盐、甲酸盐和一氧化碳。描述了 Fe(II)结合的人酶 HsARD 的溶液结构,并将其与密切相关的鼠酶 MmARD 的 Ni 结合形式的结构进行了比较。讨论了两种同工酶不同反应性的潜在合理原因。已经发现人酶通过结合基质金属蛋白酶 I (MMP-I) 的细胞质跨膜尾巴肽来调节 MMP-I 的活性,MMP-I 参与肿瘤转移。用 MMP-I 尾巴肽对 HsARD 进行核磁共振滴定,可确定 HsARD 上的肽结合位点,该位点位于紧邻动态脯氨酸丰富环的金属结合位点的前裂隙中。

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本文引用的文献

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Dual chemistry catalyzed by human acireductone dioxygenase.
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Metal-Dependent Function of a Mammalian Acireductone Dioxygenase.
Biochemistry. 2016 Mar 8;55(9):1398-407. doi: 10.1021/acs.biochem.5b01319. Epub 2016 Feb 24.
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Metal-dependent activity of Fe and Ni acireductone dioxygenases: how two electrons reroute the catalytic pathway.
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