小鼠胎盘绒毛膜发育的单细胞 RNA 测序。
Single nuclei RNA-seq of mouse placental labyrinth development.
机构信息
The Eli and Edythe Broad Center of Regeneration Medicine and Stem Cell Research, Center for Reproductive Sciences, University of California, San Francisco, San Francisco, United States.
Department of Urology, University of California, San Francisco, San Francisco, United States.
出版信息
Elife. 2020 Nov 3;9:e60266. doi: 10.7554/eLife.60266.
The placenta is the interface between mother and fetus in all eutherian species. However, our understanding of this essential organ remains incomplete. A substantial challenge has been the syncytial cells of the placenta, which have made dissociation and independent evaluation of the different cell types of this organ difficult. Here, we address questions concerning the ontogeny, specification, and function of the cell types of a representative hemochorial placenta by performing single nuclei RNA sequencing (snRNA-seq) at multiple stages of mouse embryonic development focusing on the exchange interface, the labyrinth. Timepoints extended from progenitor-driven expansion through terminal differentiation. Analysis by snRNA-seq identified transcript profiles and inferred functions, cell trajectories, signaling interactions, and transcriptional drivers of all but the most highly polyploid cell types of the placenta. These data profile placental development at an unprecedented resolution, provide insights into differentiation and function across time, and provide a resource for future study.
胎盘是所有真兽类物种中母体和胎儿之间的界面。然而,我们对这个重要器官的理解仍然不完整。一个巨大的挑战是胎盘的合胞体细胞,这使得分离和独立评估这个器官的不同细胞类型变得困难。在这里,我们通过在小鼠胚胎发育的多个阶段进行单细胞 RNA 测序 (snRNA-seq),解决了关于代表性绒毛膜胎盘的细胞类型的个体发生、特化和功能的问题,重点是交换界面,即迷宫。时间点从祖细胞驱动的扩张延伸到终末分化。通过 snRNA-seq 分析鉴定了转录本谱,并推断了所有除了胎盘最高度多倍体细胞类型之外的功能、细胞轨迹、信号相互作用和转录驱动因子。这些数据以前所未有的分辨率描绘了胎盘的发育,提供了关于分化和功能随时间的深入了解,并为未来的研究提供了资源。