Fianchini Mauro, Llorens Lluis, Pericàs Miquel A
Institute of Chemical Research of Catalonia (ICIQ), The Barcelona Institute of Science and Technology, Avgda Països Catalans, 16, 43007 Tarragona, Catalonia, Spain.
Departament de Química Inorgànica i Orgànica, Universitat de Barcelona (UB), 08028 Barcelona, Catalonia, Spain.
J Phys Chem B. 2020 Nov 19;124(46):10486-10499. doi: 10.1021/acs.jpcb.0c08507. Epub 2020 Nov 9.
Cucurbiturils are a family of supramolecular hosts obtained by condensation of glycoluril and formaldehyde. Cucurbit[7]uril, , is the most prominent member of the family for its biomolecular interest, arising from its mild solubility in water and for its strong binding with a large variety of guests containing nonpolar fragments such as adamantanes and ferrocene. For instance, CB[7] encapsulates diamantane diammonium iodide with an attomolar dissociation constant, a value unmatched even in natural encapsulation processes. Computational chemistry has been extensively employed to describe the enthalpic-entropic compensation principle of the molecular recognition process of cucurbituril hosts, but the synergistic contribution of experimental data is required for accurate results to be obtained. This paper proposes the first fully theoretical model able to reconcile the calculated thermodynamics of the complexation process with the experimental data obtained by calorimetry (ITC) for cucurbit[7]uril. The model allows the isolation and estimation of all of the enthalpic and entropic contributions coming from solute and solvent alike to the whole host-guest binding event and enables the straightforward calculation of the contribution of the solvation entropy to the binding.
葫芦脲是由甘脲和甲醛缩合得到的一类超分子主体。葫芦[7]脲(CB[7])是该家族中最引人注目的成员,因其对生物分子具有重要意义,这源于它在水中的适度溶解性以及与多种含有非极性片段(如金刚烷和二茂铁)的客体的强结合能力。例如,CB[7]以阿摩尔解离常数包封二金刚烷二碘化铵,这个值即使在天然包封过程中也无与伦比。计算化学已被广泛用于描述葫芦脲主体分子识别过程中的焓 - 熵补偿原理,但要获得准确结果还需要实验数据的协同贡献。本文提出了第一个完全理论模型,该模型能够将计算得到的络合过程热力学与通过量热法(ITC)获得的葫芦[7]脲实验数据相协调。该模型允许分离和估计溶质和溶剂对整个主客体结合事件的所有焓和熵贡献,并能够直接计算溶剂化熵对结合的贡献。