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MHA植物标本馆:东欧维管植物收藏

MHA Herbarium: Eastern European collections of vascular plants.

作者信息

Seregin Alexey P, Stepanova Nina Yu

机构信息

Lomonosov Moscow State University, Moscow, Russia Lomonosov Moscow State University Moscow Russia.

M.V. Lomonosov Moscow State University, Moscow, Russia M.V. Lomonosov Moscow State University Moscow Russia.

出版信息

Biodivers Data J. 2020 Oct 23;8:e57512. doi: 10.3897/BDJ.8.e57512. eCollection 2020.

Abstract

BACKGROUND

World herbaria with 387.5M specimens (Thiers 2019) are being rapidly digitised. At least 79.9M plant specimens (20.6%) are already databased throughout the globe in the standard form of GBIF-mediated data. The contribution of smaller herbaria has been steadily growing over the last few years due to cost reduction, usage of platforms and solutions developed by the leaders. A web-resource the Moscow Digital Herbarium (Seregin 2020b) was launched by the Lomonosov Moscow State University in October, 2016 for publication of specimens imaged and databased in the Moscow University Herbarium (MW). As of 31 December 2018, the web-portal included 968,031 images of 971,732 specimens digitised in MW. This dataset is available in GBIF (Seregin 2020). The global trend is largely the same in Russia, where a dozen herbaria started to scan their holdings after imaging of the nation's second largest herbarium (Kislov et al. 2017, Kovtonyuk et al. 2019, Seregin 2020a). In 2019, we started to use Moscow Digital Herbarium as a web-repository for digitised herbarium specimens from some Russian collections, starting with the Herbarium of Tsitsin Main Botanical Gaden, Russian Academy of Sciences (MHA). Due to this, a single-university system became a multi-institutional consortium in April 2019 (Seregin 2020a). The dataset of the Moscow collections and partly of the Eastern European collections of the MHA Herbarium is now available in GBIF (Seregin and Stepanova 2020).

NEW INFORMATION

MHA Herbarium imaged 64,008 specimens from Moscow Region and partly from other regions of Eastern Europe at 600 dpi and provided key metadata. These data are now fully available in the Moscow Digital Herbarium and GBIF. Complete georeferencing of the specimens from the City of Moscow was a key task in 2020. As of May 2020, 50,324 specimens, including 49,732 specimens from Russia, have been georeferenced (78.6%) and 39,448 specimens have fully-captured label transcriptions (61.6%). Based on these data, we give a detailed overview of the collections including spatial, temporal and taxonomic description of the dataset.

摘要

背景

拥有3.875亿份标本的全球植物标本馆(蒂尔斯,2019年)正在迅速实现数字化。全球至少有7990万份植物标本(占20.6%)已经以GBIF介导数据的标准形式录入数据库。在过去几年中,由于成本降低以及采用了领先机构开发的平台和解决方案,小型植物标本馆的贡献一直在稳步增长。2016年10月,莫斯科国立罗蒙诺索夫大学推出了一个网络资源——莫斯科数字植物标本馆(谢列金,2020b),用于发布莫斯科大学植物标本馆(MW)中成像并录入数据库的标本。截至2018年12月31日,该网络门户包含了MW中数字化的971732份标本的968031张图像。这个数据集可在GBIF上获取(谢列金,2020)。俄罗斯的情况在很大程度上与全球趋势相同,在该国第二大植物标本馆成像后,十几家植物标本馆开始扫描它们的馆藏(基斯洛夫等人,2017年;科夫托尼尤克等人,2019年;谢列金,2020a)。2019年,我们开始将莫斯科数字植物标本馆用作一些俄罗斯馆藏数字化植物标本的网络存储库,首先是俄罗斯科学院季米里亚泽夫植物研究所植物标本馆(MHA)。因此,一个单一大学系统在2019年4月变成了一个多机构联盟(谢列金,2020a)。MHA植物标本馆莫斯科馆藏以及部分东欧馆藏的数据集现在可在GBIF上获取(谢列金和斯捷潘诺娃,2020)。

新信息

MHA植物标本馆以600 dpi的分辨率对来自莫斯科地区以及部分东欧其他地区的64008份标本进行了成像,并提供了关键的元数据。这些数据现在已在莫斯科数字植物标本馆和GBIF上完全可用。对莫斯科市标本进行完整的地理定位是2020年的一项关键任务。截至2020年5月,已经对50324份标本进行了地理定位(占78.6%),其中包括来自俄罗斯的49732份标本,并且对39448份标本进行了完整的标签转录(占61.6%)。基于这些数据,我们对这些馆藏进行了详细概述,包括数据集的空间、时间和分类描述。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fe93/7599204/1f331f7a5f24/bdj-08-e57512-g001.jpg

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