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髓系生物学中单细胞基因组学入门

A primer on single-cell genomics in myeloid biology.

作者信息

Ferchen Kyle, Song Baobao, Leighton Grimes H

机构信息

Division of Immunobiology, Cincinnati Children's Hospital.

Department of Cancer Biology, University of Cincinnati, Cincinnati, Ohio, USA.

出版信息

Curr Opin Hematol. 2021 Jan;28(1):11-17. doi: 10.1097/MOH.0000000000000623.

Abstract

PURPOSE OF REVIEW

Understanding the fast-moving field of single-cell technologies, as applied to myeloid biology, requires an appreciation of basic molecular, informatics, and biological concepts. Here, we highlight both key and recent articles to illustrate basic concepts for those new to molecular single-cell analyses in myeloid hematology.

RECENT FINDINGS

Recent studies apply single-cell omics to discover novel cell populations, construct relationships between cell populations, reconfigure the organization of hematopoiesis, and study hematopoietic lineage tree and fate choices. Accompanying development of technologies, new informatic tools have emerged, providing exciting new insights.

SUMMARY

Hematopoietic stem and progenitor cells are regulated by complex intrinsic and extrinsic factors to produce blood cell types. In this review, we discuss recent advances in single-cell omics to profile these cells, methods to infer cell type identify, and trajectories from molecular omics data to ultimately derive new insights into hematopoietic stem and progenitor cell biology. We further discuss future applications of these technologies to understand hematopoietic cell interactions, function, and development. The goal is to offer a comprehensive overview of current single-cell technologies and their impact on our understanding of myeloid cell development for those new to single-cell analyses.

摘要

综述目的

要理解应用于髓系生物学的快速发展的单细胞技术领域,需要了解基本的分子、信息学和生物学概念。在此,我们重点介绍关键文章和近期文章,为髓系血液学中分子单细胞分析的新手阐述基本概念。

最新发现

近期研究应用单细胞组学来发现新的细胞群体、构建细胞群体之间的关系、重新构建造血组织架构,并研究造血谱系树和命运选择。随着技术的发展,新的信息学工具应运而生,提供了令人兴奋的新见解。

总结

造血干细胞和祖细胞受复杂的内在和外在因素调控,以产生血细胞类型。在本综述中,我们讨论了单细胞组学在剖析这些细胞方面的最新进展、推断细胞类型识别的方法,以及从分子组学数据得出细胞轨迹,最终获得对造血干细胞和祖细胞生物学的新见解。我们还讨论了这些技术在理解造血细胞相互作用、功能和发育方面的未来应用。目标是为单细胞分析新手全面概述当前的单细胞技术及其对我们理解髓系细胞发育的影响。

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A primer on single-cell genomics in myeloid biology.髓系生物学中单细胞基因组学入门
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