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等离子体分析在临床组织样本中无扩增的癌症生物标志物检测。

Plasmonic assay for amplification-free cancer biomarkers detection in clinical tissue samples.

机构信息

Fitzpatrick Institute for Photonics, Duke University, Durham, NC, USA; Department of Head and Neck Surgery and Communication Sciences, Duke School of Medicine, Durham, NC, USA.

Fitzpatrick Institute for Photonics, Duke University, Durham, NC, USA; Biomedical Engineering Department, Duke University, Durham, NC, USA.

出版信息

Anal Chim Acta. 2020 Dec 1;1139:111-118. doi: 10.1016/j.aca.2020.09.003. Epub 2020 Sep 8.

Abstract

Developing countries have seen a rise in cancer incidence and are projected to harbor three-quarters of all cancer-related mortality by 2030. While disproportionally affected by the burden of cancer, these regions are ill-equipped to handle the diagnostic caseload. The low number of trained pathologists per capita results in delayed diagnosis and treatment, ultimately contributing to increased mortality rates. To address this issue, we developed a point-of-care (POC) plasmonic assay for direct detection of cancer as an alternative to pathological review. Whereas our assay has general applicability in many cancer diagnoses that involve tissue biopsies, we use head and neck cancer (HNC) as a model system because these tumors are increasingly prevalent in lower-income and underserved regions, due to risk factors such as smoking, drinking, and viral infection. Our method uses surface-enhanced Raman scattering (SERS) to detect unique RNA biomarkers from human biopsy samples without the need for complex target amplification machinery (e.g., PCR), making it time and resource-efficient. Unlike previous studies that required target amplification, this work represents a significant advance for HNC diagnosis directly in clinical samples, using only our SERS-based assay for RNA biomarkers. In this study, we tested our assay on 20 clinical samples, demonstrating the accuracy of the method in the diagnosis of head and neck squamous cell carcinoma. We reported sensitivity of 100% and specificity of 97%. Furthermore, we used a handheld Raman device to read the results in order to illustrate the applicability of our method for POC diagnosis of cancer in low-resource settings.

摘要

发展中国家的癌症发病率上升,预计到 2030 年将承担四分之三与癌症相关的死亡人数。尽管这些地区受到癌症负担的不成比例的影响,但它们缺乏处理诊断病例的能力。人均受过培训的病理学家人数较少导致诊断和治疗延迟,最终导致死亡率上升。为了解决这个问题,我们开发了一种即时护理(POC)等离子体检测方法,用于直接检测癌症,作为病理检查的替代方法。虽然我们的检测方法在许多涉及组织活检的癌症诊断中具有普遍适用性,但我们使用头颈部癌症(HNC)作为模型系统,因为这些肿瘤在低收入和服务不足地区越来越普遍,这是由于吸烟、饮酒和病毒感染等风险因素。我们的方法使用表面增强拉曼散射(SERS)来检测来自人类活检样本的独特 RNA 生物标志物,而无需复杂的靶标扩增机制(例如 PCR),因此具有时间和资源效率。与以前需要靶标扩增的研究不同,这项工作代表了直接在临床样本中对头颈部鳞状细胞癌进行诊断的重大进展,仅使用我们基于 SERS 的 RNA 生物标志物检测方法。在这项研究中,我们在 20 个临床样本上测试了我们的检测方法,证明了该方法对头颈部鳞状细胞癌诊断的准确性。我们报告的敏感性为 100%,特异性为 97%。此外,我们使用手持式 Raman 设备读取结果,以说明我们的方法在手头资源有限的情况下用于即时护理癌症诊断的适用性。

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