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单细胞海洋真菌在春季浮游植物爆发期间的多样性和生物量动态。

Diversity and biomass dynamics of unicellular marine fungi during a spring phytoplankton bloom.

机构信息

Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Bremen, Germany.

Molecular Ecology Group, FB2, University of Bremen, Bremen, Germany.

出版信息

Environ Microbiol. 2021 Jan;23(1):448-463. doi: 10.1111/1462-2920.15331. Epub 2020 Dec 3.

DOI:10.1111/1462-2920.15331
PMID:33201558
Abstract

Microbial communities have important functions during spring phytoplankton blooms, regulating bloom dynamics and processing organic matter. Despite extensive research into such processes, an in-depth assessment of the fungal component is missing, especially for the smaller size fractions. We investigated the dynamics of unicellular mycoplankton during a spring phytoplankton bloom in the North Sea by 18S rRNA gene tag sequencing and a modified CARD-FISH protocol. Visualization and enumeration of dominant taxa revealed unique cell count patterns that varied considerably over short time scales. The Rozellomycota sensu lato (s.l.) reached a maximum of 10 cells L , being comparable to freshwater counts. The abundance of Dikarya surpassed previous values by two orders of magnitude (10 cells L ) and the corresponding biomass (maximum of 8.9 mg C m ) was comparable to one reported for filamentous fungi with assigned ecological importance. Our results show that unicellular fungi are an abundant and, based on high cellular ribosome content and fast dynamics, active part of coastal microbial communities. The known ecology of the visualized taxa and the observed dynamics suggest the existence of different ecological niches that link primary and secondary food chains, highlighting the importance of unicellular fungi in food web structures and carbon transfer.

摘要

微生物群落在春季浮游植物爆发期间具有重要功能,它们可以调节浮游植物爆发的动态变化并处理有机物质。尽管已经对这些过程进行了广泛的研究,但对真菌组成部分的深入评估仍然缺失,尤其是对于较小的粒径分数。我们通过 18S rRNA 基因标签测序和改良的 CARD-FISH 方案,研究了北海春季浮游植物爆发期间单细胞菌浮游生物的动态变化。通过对优势分类群的可视化和计数,揭示了独特的细胞计数模式,这些模式在短时间尺度上变化很大。Rozellomycota sensu lato(s.l.)的数量达到了 10 个细胞 L,与淡水计数相当。Dikarya 的丰度超过了之前两个数量级(10 个细胞 L),相应的生物量(最大值为 8.9mg C m)与具有指定生态重要性的丝状真菌相当。我们的研究结果表明,单细胞真菌是沿海微生物群落中丰富的组成部分,并且基于高细胞核糖体含量和快速的动态变化,它们是活跃的一部分。可视化分类群的已知生态学和观察到的动态变化表明,存在不同的生态位,这些生态位将初级和次级食物链联系起来,突出了单细胞真菌在食物网结构和碳转移中的重要性。

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