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三种海洋真菌在主要细胞类型中的大分子组成和底物范围。

Macromolecular composition and substrate range of three marine fungi across major cell types.

作者信息

Thomas Seth, Lengger Sabine K, Bird Kimberley E, Allen Ro, Cunliffe Michael

机构信息

Marine Biological Association, The Laboratory, Citadel Hill, Plymouth, PL1 2PB, UK.

School of Geography, Earth and Environmental Sciences, University of Plymouth, Plymouth, PL4 8AA, UK.

出版信息

FEMS Microbes. 2022 Jan 24;3:xtab019. doi: 10.1093/femsmc/xtab019. eCollection 2022.

DOI:10.1093/femsmc/xtab019
PMID:37332499
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10117802/
Abstract

Marine fungi exist as three major cell types: unicellular yeasts, filamentous hyphae and zoosporic early-diverging forms, such as the Chytridiomycota (chytrids). To begin to understand the ecological and biogeochemical influence of these cell types within the wider context of other plankton groups, cell size and macromolecular composition must be assessed across all three cell types. Using a mass-balance approach to culture, we describe quantitative differences in substrate uptake and subsequent macromolecular distribution in three model marine fungi: the yeast , the filamentous and chytrid . We compared these model cell types with select oleaginous phytoplankton of specific biotechnological interest through metanalysis. We hypothesise that fungal cell types will maintain a significantly different macromolecular composition to one another and further represent an alternative grazing material to bacterioplankton and phytoplankton for higher trophic levels. Assessment of carbon substrate range and utilisation using phenotype arrays suggests that marine fungi have a wide substrate range. Fungi also process organic matter to an elevated-lipid macromolecular composition with reduced-protein content. Because of their size and increased lipid composition compared to other plankton groups, we propose that fungi represent a compositionally distinct, energy-rich grazing resource in marine ecosystems. We propose that marine fungi could act as vectors of organic matter transfer across trophic boundaries, and supplement our existing understanding of the microbial loop and carbon transfer in marine ecosystems.

摘要

海洋真菌以三种主要细胞类型存在

单细胞酵母、丝状菌丝以及游动孢子的早期分化形式,如壶菌门(壶菌)。为了在其他浮游生物群体的更广泛背景下开始理解这些细胞类型的生态和生物地球化学影响,必须对所有这三种细胞类型的细胞大小和大分子组成进行评估。我们采用质量平衡培养方法,描述了三种海洋真菌模型——酵母、丝状真菌和壶菌——在底物摄取和随后大分子分布方面的定量差异。我们通过荟萃分析将这些模型细胞类型与具有特定生物技术意义的选定产油浮游植物进行了比较。我们假设真菌细胞类型彼此之间将保持显著不同的大分子组成,并且进一步代表了一种与浮游细菌和浮游植物不同的、可供更高营养级摄食的物质。使用表型阵列评估碳底物范围和利用情况表明,海洋真菌具有广泛的底物范围。真菌还将有机物加工成脂质含量升高、蛋白质含量降低的大分子组成。由于与其他浮游生物群体相比,它们的大小和脂质组成增加,我们认为真菌在海洋生态系统中代表了一种组成独特、能量丰富的摄食资源。我们提出海洋真菌可以作为跨越营养边界的有机物转移载体,并补充我们对海洋生态系统中微生物环和碳转移的现有理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc75/10117802/fc47f410aa4b/xtab019fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc75/10117802/2c30ef17c6ee/xtab019fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc75/10117802/7e2b35d741bf/xtab019fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc75/10117802/bc46852243ca/xtab019fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc75/10117802/5c8cbbb19389/xtab019fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc75/10117802/2fd8aa3e8c37/xtab019fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc75/10117802/fc47f410aa4b/xtab019fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc75/10117802/2c30ef17c6ee/xtab019fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc75/10117802/7e2b35d741bf/xtab019fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc75/10117802/bc46852243ca/xtab019fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc75/10117802/5c8cbbb19389/xtab019fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc75/10117802/2fd8aa3e8c37/xtab019fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc75/10117802/fc47f410aa4b/xtab019fig6.jpg

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本文引用的文献

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Diversity and biomass dynamics of unicellular marine fungi during a spring phytoplankton bloom.单细胞海洋真菌在春季浮游植物爆发期间的多样性和生物量动态。
Environ Microbiol. 2021 Jan;23(1):448-463. doi: 10.1111/1462-2920.15331. Epub 2020 Dec 3.
2
Depth-dependent mycoplankton glycoside hydrolase gene activity in the open ocean-evidence from the Tara Oceans eukaryote metatranscriptomes.海洋真核生物宏转录组揭示开阔海域中微生物糖苷水解酶基因活性的深度依赖性
ISME J. 2020 Sep;14(9):2361-2365. doi: 10.1038/s41396-020-0687-2. Epub 2020 Jun 3.
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Chytrid fungi distribution and co-occurrence with diatoms correlate with sea ice melt in the Arctic Ocean.
了解珊瑚礁相关真菌的多样性和功能的路线图。
FEMS Microbiol Rev. 2022 Nov 2;46(6). doi: 10.1093/femsre/fuac028.
角毛藻真菌的分布和共生与北冰洋海冰融化有关。
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Modular Assembly of Polysaccharide-Degrading Marine Microbial Communities.多糖降解海洋微生物群落的模块化组装。
Curr Biol. 2019 May 6;29(9):1528-1535.e6. doi: 10.1016/j.cub.2019.03.047. Epub 2019 Apr 25.
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Marine fungi.海洋真菌。
Curr Biol. 2019 Mar 18;29(6):R191-R195. doi: 10.1016/j.cub.2019.02.009.
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Fungi in aquatic ecosystems.水生生态系统中的真菌。
Nat Rev Microbiol. 2019 Jun;17(6):339-354. doi: 10.1038/s41579-019-0175-8.
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Fungi in the Marine Environment: Open Questions and Unsolved Problems.海洋环境中的真菌:悬而未决的问题和未解决的问题。
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Arctic marine fungi: biomass, functional genes, and putative ecological roles.北极海洋真菌:生物量、功能基因和潜在生态作用。
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