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剖析病原体敏感基因启动子在植物防御中的作用

Dissecting the Role of Promoters of Pathogen-sensitive Genes in Plant Defense.

作者信息

Baruah Indrani, Baldodiya Gajendra Mohan, Sahu Jagajjit, Baruah Geetanjali

机构信息

1Biotechnology Group, CSIR-NEIST, Jorhat-785006, Assam, India; 2Academy of Scientific and Innovative Research (AcSIR), CSIR-NEIST Campus, Jorhat-785006, Assam, India; 3Department of Agricultural Biotechnology, Assam Agricultural University, Jorhat-785013, Assam, India; 4Department of Mycology & Plant Pathology, Institute of Agricultural Sciences, Banaras Hindu University (BHU), Varanasi-221005, Uttar Pradesh, India; 5Environment Division, Assam Science Technology & Environment Council, Bigyan Bhawan, Guwahati-781005, Assam, India.

出版信息

Curr Genomics. 2020 Nov;21(7):491-503. doi: 10.2174/1389202921999200727213500.

Abstract

Plants inherently show resistance to pathogen attack but are susceptible to multiple bacteria, viruses, fungi, and phytoplasmas. Diseases as a result of such infection leads to the deterioration of crop yield. Several pathogen-sensitive gene activities, promoters of such genes, associated transcription factors, and promoter elements responsible for crosstalk between the defense signaling pathways are involved in plant resistance towards a pathogen. Still, only a handful of genes and their promoters related to plant resistance have been identified to date. Such pathogen-sensitive promoters are accountable for elevating the transcriptional activity of certain genes in response to infection. Also, a suitable promoter is a key to devising successful crop improvement strategies as it ensures the optimum expression of the required transgene. The study of the promoters also helps in mining more details about the transcription factors controlling their activities and helps to unveil the involvement of new genes in the pathogen response. Therefore, the only way out to formulate new solutions is by analyzing the molecular aspects of these promoters in detail. In this review, we provided an overview of the promoter motifs and cis-regulatory elements having specific roles in pathogen attack response. To elaborate on the importance and get a vivid picture of the pathogen-sensitive promoter sequences, the key motifs and promoter elements were analyzed with the help of PlantCare and interpreted with available literature. This review intends to provide useful information for reconstructing the gene networks underlying the resistance of plants against pathogens.

摘要

植物天生对病原体攻击具有抗性,但易受多种细菌、病毒、真菌和植原体的侵害。此类感染导致的疾病会使作物产量下降。植物对病原体的抗性涉及多种病原体敏感基因的活性、此类基因的启动子、相关转录因子以及负责防御信号通路间相互作用的启动子元件。然而,迄今为止,仅鉴定出少数与植物抗性相关的基因及其启动子。此类病原体敏感启动子负责在感染时提高某些基因的转录活性。此外,合适的启动子是制定成功的作物改良策略的关键,因为它能确保所需转基因的最佳表达。对启动子的研究还有助于挖掘更多有关控制其活性的转录因子的细节,并有助于揭示新基因在病原体反应中的作用。因此,制定新解决方案的唯一途径是详细分析这些启动子的分子层面。在本综述中,我们概述了在病原体攻击反应中具有特定作用的启动子基序和顺式调控元件。为详细阐述病原体敏感启动子序列的重要性并获得直观认识,借助PlantCare对关键基序和启动子元件进行了分析,并结合现有文献进行了解读。本综述旨在为重建植物抗病原体抗性的基因网络提供有用信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9fc6/7604749/b27b8731b9a7/CG-21-491_F1.jpg

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