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结构洞察一种特异性存在于缓步动物中的 C2 结构域蛋白。

Structural insights into a C2 domain protein specifically found in tardigrades.

机构信息

Graduate School of Pharmaceutical Science, Osaka University, Osaka, Japan.

出版信息

Protein Sci. 2021 Feb;30(2):513-518. doi: 10.1002/pro.4002. Epub 2020 Dec 28.

Abstract

Some tardigrades can survive extremely desiccated conditions through transition into a state called anhydrobiosis. Anhydrobiotic tardigrades have proteins unique to them and they are thought to be keys to the understanding of unusual desiccation resistance. In fact, previous transcriptome data show that several tardigrade-specific proteins are significantly upregulated under desiccated conditions. However, their physiological roles and chemical properties have been ambiguous because they show low or no similarity of amino acid sequences to proteins found in other organisms. Here, we report a crystal structure of one of such proteins. This protein shows a β-sandwich structure composed of 8 β-strands, three Ca -binding sites, and hydrophobic residues on Ca -binding (CBD) loops, which resemble characteristics of C2 domain proteins. We therefore conveniently describe this protein as tardigrade C2 domain protein (TC2P). Because the C2 domain functions as a Ca -mediated membrane docking module, which is related to signal transduction or membrane trafficking, TC2Ps may play a role in Ca -triggered phenomenon under desiccated situations. Our finding provides not only structural insights into a newly discovered desiccation-related protein family but also insights into the evolution and diversity of C2 domain proteins.

摘要

一些水熊虫可以通过进入一种称为脱水休眠的状态来在极度干燥的条件下存活。脱水休眠的水熊虫具有它们特有的蛋白质,它们被认为是理解不寻常的干燥耐受性的关键。事实上,之前的转录组数据表明,在干燥条件下,几种水熊虫特异性蛋白显著上调。然而,由于它们的氨基酸序列与其他生物中的蛋白质没有相似性或相似性很低,因此它们的生理作用和化学性质一直不清楚。在这里,我们报告了其中一种蛋白质的晶体结构。该蛋白显示由 8 个β-链组成的β-三明治结构,三个 Ca 结合位点和 Ca 结合(CBD)环上的疏水性残基,类似于 C2 结构域蛋白的特征。因此,我们方便地将该蛋白描述为水熊虫 C2 结构域蛋白(TC2P)。由于 C2 结构域作为 Ca 介导的膜对接模块发挥作用,与信号转导或膜运输有关,TC2P 在干燥情况下的 Ca 触发现象中可能发挥作用。我们的发现不仅为新发现的与干燥相关的蛋白质家族提供了结构见解,也为 C2 结构域蛋白的进化和多样性提供了见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4505/7784755/cdacc99518b8/PRO-30-513-g001.jpg

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