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DNA甲基化作为恶性胸膜间皮瘤总生存期的预测指标

DNA Methylation of as Predictor of Overall Survival in Malignant Pleural Mesothelioma.

作者信息

Cugliari Giovanni, Catalano Chiara, Guarrera Simonetta, Allione Alessandra, Casalone Elisabetta, Russo Alessia, Grosso Federica, Ferrante Daniela, Viberti Clara, Aspesi Anna, Sculco Marika, Pirazzini Chiara, Libener Roberta, Mirabelli Dario, Magnani Corrado, Dianzani Irma, Matullo Giuseppe

机构信息

Department of Medical Sciences, University of Turin, 10126 Turin, Italy.

Italian Institute for Genomic Medicine, IIGM, 10060 Candiolo, Italy.

出版信息

Cancers (Basel). 2020 Nov 21;12(11):3470. doi: 10.3390/cancers12113470.

Abstract

Malignant pleural mesothelioma (MPM) is an aggressive tumor with median survival of 12 months and limited effective treatments. The scope of this study was to study the relationship between blood DNA methylation (DNAm) and overall survival (OS) aiming at a noninvasive prognostic test. We investigated a cohort of 159 incident asbestos exposed MPM cases enrolled in an Italian area with high incidence of mesothelioma. Considering 12 months as a cut-off for OS, epigenome-wide association study (EWAS) revealed statistically significant ( value = 7.7 × 10) OS-related differential methylation of a single-CpG (cg03546163), located in the 5'UTR region of the gene. This is an independent marker of prognosis in MPM patients with a better performance than traditional inflammation-based scores such as lymphocyte-to-monocyte ratio (LMR). Cases with DNAm < 0.45 at the cg03546163 had significantly poor survival compared with those showing DNAm ≥ 0.45 (mean: 243 versus 534 days; value< 0.001). Epigenetic changes at the gene were robustly associated with OS in MPM cases. Our results showed that blood DNA methylation levels could be promising and dynamic prognostic biomarkers in MPM.

摘要

恶性胸膜间皮瘤(MPM)是一种侵袭性肿瘤,中位生存期为12个月,有效治疗方法有限。本研究的目的是研究血液DNA甲基化(DNAm)与总生存期(OS)之间的关系,旨在建立一种非侵入性预后检测方法。我们调查了一组159例新诊断的石棉暴露相关MPM病例,这些病例来自意大利一个间皮瘤高发地区。以12个月作为OS的截断值,全基因组关联研究(EWAS)显示,位于基因5'UTR区域的一个单CpG(cg03546163)存在与OS相关的差异甲基化,具有统计学意义(P值 = 7.7 × 10)。这是MPM患者预后的一个独立标志物,其性能优于传统的基于炎症的评分,如淋巴细胞与单核细胞比值(LMR)。在cg03546163处DNAm < 0.45的病例与DNAm≥0.45的病例相比,生存期显著较差(平均值:243天对534天;P值<0.001)。在MPM病例中,基因处的表观遗传变化与OS密切相关。我们的结果表明,血液DNA甲基化水平可能是MPM中有前景的动态预后生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d9b/7700347/4b7a204fd6ce/cancers-12-03470-g001.jpg

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