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拟南芥防御激发过程中 SUMO1-SUMOylome 变化的蛋白质组学分析。

Proteomic analysis of SUMO1-SUMOylome changes during defense elicitation in Arabidopsis.

机构信息

Laboratory of Signal Transduction and Plant Resistance, UNESCO-Regional Centre for Biotechnology (RCB), NCR Biotech Science Cluster, 3(rd) Milestone, Faridabad-Gurgaon Expressway, Faridabad 121 001, Haryana, India; Kalinga Institute of Industrial Technology (KIIT) University, Bhubaneswar 751 024, Odisha, India.

Laboratory of Signal Transduction and Plant Resistance, UNESCO-Regional Centre for Biotechnology (RCB), NCR Biotech Science Cluster, 3(rd) Milestone, Faridabad-Gurgaon Expressway, Faridabad 121 001, Haryana, India.

出版信息

J Proteomics. 2021 Feb 10;232:104054. doi: 10.1016/j.jprot.2020.104054. Epub 2020 Nov 22.

Abstract

Rapid adaptation of plants to developmental or physiological cues is facilitated by specific receptors that transduce the signals mostly via post-translational modification (PTM) cascades of downstream partners. Reversible covalent attachment of SMALL UBIQUITIN-LIKE MODIFIER (SUMO), a process termed as SUMOylation, influence growth, development and adaptation of plants to various stresses. Strong regulatory mechanisms maintain the steady-state SUMOylome and mutants with SUMOylation disturbances display mis-primed immunity often with growth consequences. Identity of the SUMO-substrates undergoing SUMOylation changes during defenses however remain largely unknown. Here we exploit either the auto-immune property of an Arabidopsis mutant or defense responses induced in wild-type plants against Pseudomonas syringae pv tomato (PstDC3000) to enrich and identify SUMO1-substrates. Our results demonstrate massive enhancement of SUMO1-conjugates due to increased SUMOylation efficiencies during defense responses. Of the 261 proteins we identify, 29 have been previously implicated in immune-associated processes. Role of others expand to diverse cellular roles indicating massive readjustments the SUMOylome alterations may cause during induction of immunity. Overall, our study highlights the complexities of a plant immune network and identifies multiple SUMO-substrates that may orchestrate the signaling. SIGNIFICANCE: In all eukaryotes, covalent linkage of the SMALL UBIQUITIN-LIKE MODIFIER (SUMOs), a process termed as SUMOylation, on target proteins affect their fate and function. Plants display reversible readjustments in the pool of SUMOylated proteins during biotic and abiotic stress responses. Here, we demonstrate net increase in global SUMO1/2-SUMOylome of Arabidopsis thaliana at induction of immunity. We enrich and identify 261 SUMO1-substrates enhanced in defenses that categorize to diverse cellular processes and include novel candidates with uncharacterized immune-associated roles. Overall, our results highlight intricacies of SUMO1-orchestration in defense signaling networks.

摘要

植物对发育或生理线索的快速适应是由特定的受体介导的,这些受体主要通过下游伙伴的翻译后修饰(PTM)级联来传递信号。可逆的小分子泛素样修饰(SUMO)共价连接,这一过程称为 SUMOylation,影响植物的生长、发育和对各种胁迫的适应。强大的调节机制维持着稳定的 SUMOylome,而 SUMOylation 紊乱的突变体表现出错误的初始免疫,通常伴随着生长后果。然而,在防御过程中经历 SUMOylation 的 SUMO 底物的身份在很大程度上仍然未知。在这里,我们利用拟南芥突变体的自身免疫特性或野生型植物对丁香假单胞菌 pv 番茄(PstDC3000)的防御反应,来富集和鉴定 SUMO1 底物。我们的结果表明,在防御反应过程中,由于 SUMOylation 效率的提高,导致 SUMO1 缀合物大量增强。在我们鉴定的 261 种蛋白质中,有 29 种先前被认为与免疫相关过程有关。其他的作用扩展到不同的细胞角色,表明在诱导免疫过程中,SUMOylome 的改变可能会引起大规模的调整。总的来说,我们的研究强调了植物免疫网络的复杂性,并确定了多个可能协调信号的 SUMO 底物。

意义

在所有真核生物中,目标蛋白上的 SMALL UBIQUITIN-LIKE MODIFIER(SUMO)的共价连接,这一过程称为 SUMOylation,会影响它们的命运和功能。植物在生物和非生物胁迫反应过程中,对 SUMOylated 蛋白库进行可逆的重新调整。在这里,我们在诱导免疫时,证明了拟南芥中全局 SUMO1/2-SUMOylome 的净增加。我们富集和鉴定了 261 种在防御中增强的 SUMO1 底物,这些底物分类为不同的细胞过程,包括具有未表征的免疫相关作用的新候选物。总的来说,我们的结果突出了 SUMO1 在防御信号网络中的协调复杂性。

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