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两种亚马逊特有水韭属植物的遗传多样性与种群结构

The genetic diversity and population structure of two endemic Amazonian quillwort ( L.) species.

作者信息

Santos Mirella Pupo, Araujo João V S Rabelo, Lopes Arthur V Sant'anna, Vettorazzi Julio Cesar Fiorio, Boechat Marcela Santana Bastos, Arêdes Fernanda AbreuSantana, Campos Naiara Viana, Calderon Emiliano Nicolas, Santos Fernando M Gomes, Fernandes Tais Nogueira, da Fonseca Rodrigo Nunes, Pereira Messias Gonzaga, Oliveira Guilherme, Zandonadi Daniel Basilio, Martins RodrigoLemes, Esteves Francisco de Assis

机构信息

Instituto de Sustentabilidade e Biodiversidade, Universidade Federal do Rio de Janeiro, Macaé, Rio de Janeiro, Brazil.

Laboratório de Melhoramento Genético Vegetal, Universidade Estadual do Norte Fluminense, Campos dos Goytacazes, Rio de Janeiro, Brazil.

出版信息

PeerJ. 2020 Nov 9;8:e10274. doi: 10.7717/peerj.10274. eCollection 2020.

Abstract

BACKGROUND

Two endemic lycophyte species and have been recently described in the State of Pará in the Amazon forest located in northern Brazil. L. has survived through three mass extinctions. Plants are considered small-sized, heterosporous, and can display a great diversity of physiological adaptations to different environments. Thus, the current study aimed to estimate the genetic variation of the populations of and to generate information about their different mechanisms for survival at the same geographical location that could point to different reproductive, adaptative and dispersal strategies and should be considered for effective conservation strategies.

METHODS

The genetic diversity and population structure of and were investigated using Inter Simple Sequence Repeat (ISSR) molecular markers. Total genomic DNA was isolated, and the genetic diversity parameters were calculated.

RESULTS

The sixteen primers produced 115 reproducible bands, 87% of which were polymorphic. A high level of polymorphic loci (81.74% and 68.48%) and a high Shannon index (Sh = 0.376 and 0.289) were observed for and , respectively. The coefficient of genetic differentiation between population areas (G) showed a higher value in (0.5440). Gene flow was higher in (1.715) and lower in populations (0.419). Overall, the results further show that and are two species with considerable genetic variation and that these differences may reflect their habitats and modes of reproduction. These results should be considered in the development of effective conservation strategies for both species.

摘要

背景

最近在巴西北部亚马逊森林的帕拉州发现了两种地方性石松类植物物种和。已经历经三次大规模灭绝而存活下来。这些植物被认为是小型、具异型孢子的,并且能够表现出对不同环境的多种生理适应性。因此,本研究旨在估计和种群的遗传变异,以获取有关它们在同一地理位置的不同生存机制的信息,这些机制可能指向不同的繁殖、适应和扩散策略,并且在制定有效的保护策略时应予以考虑。

方法

使用简单重复序列区间(ISSR)分子标记研究和的遗传多样性和种群结构。提取总基因组DNA,并计算遗传多样性参数。

结果

16条引物产生了115条可重复条带,其中87% 为多态性条带。和分别观察到高水平的多态性位点(81.74% 和68.48%)以及高香农指数(Sh = 0.376和0.289)。种群区域间的遗传分化系数(G)在中显示出较高的值(0.5440)。基因流在中较高(1.715),而在种群中较低(0.419)。总体而言,结果进一步表明和是两个具有相当大遗传变异的物种,并且这些差异可能反映了它们的栖息地和繁殖方式。在为这两个物种制定有效的保护策略时应考虑这些结果。

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