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韩国鸡肉中携带 optrA 的屎肠球菌的分子特征。

Molecular characteristics of optrA-carrying Enterococcus faecalis from chicken meat in South Korea.

机构信息

College of Veterinary Medicine & Zoonoses Research Institute, Kyungpook National University, Daegu 41566, Republic of Korea.

Animal Disease Diagnostic Division, Animal and Plant Quarantine Agency, Gimcheon-si, Gyeongsangbuk-do 39660, Republic of Korea.

出版信息

Poult Sci. 2020 Dec;99(12):6990-6996. doi: 10.1016/j.psj.2020.08.062. Epub 2020 Sep 12.

Abstract

The purpose of this study was to identify the genetic environment of optrA gene in linezolid (LZD)-resistant Enterococcus faecalis from chicken meat and to describe the probable mechanism of dissemination of the optrA gene through plasmid or chromosomal integration. Whole genome sequencing and analysis revealed that all 3 E. faecalis isolates confirmed as LZD- and chloramphenicol-resistant carried fexA adjacent to the optrA gene as well as a variety of resistance genes for macrolides, tetracyclines, and aminoglycosides, simultaneously. But, the other genes conferring LZD resistance, cfr and poxtA, were not detected in those strains. Two isolates harboring the optrA gene in their chromosomal DNA showed >99% similarity in arrangement to the transposon Tn6674 and the transposase genes, tnpA, tnpB, and tnpC and were located in the first open reading frame for transposase. One isolate harboring an optrA-carrying plasmid also showed >99% similarity with the previously reported pE439 plasmid but had 2 amino acid changes (Thr96Lys and Tyr160Asp) and a higher minimum inhibitory concentration against LZD of 16 mg/L than that of pE439 (8 mg/L). Mobile genetic elements such as transposons or plasmids flanking the optrA gene conduct a crucial role in the dissemination of antimicrobial resistance genes. Further investigations are required to identify the way by which optrA is integrated into chromosomal DNA and plasmids.

摘要

本研究旨在鉴定来自鸡肉的利奈唑胺(LZD)耐药粪肠球菌中 optrA 基因的遗传环境,并描述 optrA 基因通过质粒或染色体整合传播的可能机制。全基因组测序和分析表明,所有 3 株被确认为 LZD 和氯霉素耐药的粪肠球菌均携带 fexA 紧邻 optrA 基因,同时还携带多种用于大环内酯类、四环素类和氨基糖苷类的耐药基因。但是,未在这些菌株中检测到赋予 LZD 耐药性的其他基因 cfr 和 poxtA。2 株含有 optrA 基因的染色体 DNA 的菌株在排列上与转座子 Tn6674 和转座酶基因 tnpA、tnpB 和 tnpC 高度相似,位于转座酶的第一个开放阅读框中。一株携带 optrA 基因的质粒也与先前报道的 pE439 质粒高度相似,但有 2 个氨基酸变化(Thr96Lys 和 Tyr160Asp),对 LZD 的最低抑菌浓度比 pE439(8 mg/L)高 16 mg/L。侧翼 optrA 基因的移动遗传元件,如转座子或质粒,在传播抗菌药物耐药基因方面发挥着关键作用。需要进一步研究以确定 optrA 整合到染色体 DNA 和质粒的方式。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c3c8/7704738/a9b26485a41a/gr1.jpg

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