IEEE Trans Med Imaging. 2021 Mar;40(3):891-904. doi: 10.1109/TMI.2020.3041227. Epub 2021 Mar 2.
A critical challenge in using longitudinal neuroimaging data to study the progressions of Alzheimer's Disease (AD) is the varied number of missing records of the patients during the course when AD develops. To tackle this problem, in this paper we propose a novel formulation to learn an enriched representation with fixed length for imaging biomarkers, which aims to simultaneously capture the information conveyed by both baseline neuroimaging record and progressive variations characterized by varied counts of available follow-up records over time. Because the learned biomarker representations are a set of fixed-length vectors, they can be readily used by traditional machine learning models to study AD developments. Take into account that the missing brain scans are not aligned in terms of time in a studied cohort, we develop a new objective that maximizes the ratio of the summations of a number of l -norm distances for improved robustness, which, though, is difficult to efficiently solve in general. Thus, we derive a new efficient and non-greedy iterative solution algorithm and rigorously prove its convergence. We have performed extensive experiments on the Alzheimer's Disease Neuroimaging Initiative (ADNI) cohort. A clear performance gain has been achieved in predicting ten different cognitive scores when we compare the original baseline biomarker representations against the learned representations with longitudinal enrichments. We further observe that the top selected biomarkers by our new method are in accordance with known knowledge in AD studies. These promising results have demonstrated improved performances of our new method that validate its effectiveness.
使用纵向神经影像学数据来研究阿尔茨海默病(AD)进展的一个关键挑战是,在 AD 发展过程中,患者的记录存在大量缺失。为了解决这个问题,本文提出了一种新的方法,用于学习具有固定长度的成像生物标志物的丰富表示,旨在同时捕获基线神经影像学记录所传达的信息和随时间变化的可用随访记录数量的变化特征。由于学习到的生物标志物表示是一组固定长度的向量,因此它们可以被传统的机器学习模型轻松用于研究 AD 的发展。考虑到研究队列中缺失的大脑扫描在时间上没有对齐,我们开发了一个新的目标,即最大化 l-范数距离的和的比例,以提高鲁棒性,尽管这在一般情况下很难有效地解决。因此,我们推导出了一种新的高效且非贪婪的迭代求解算法,并严格证明了其收敛性。我们在阿尔茨海默病神经影像学倡议(ADNI)队列上进行了广泛的实验。当我们将原始基线生物标志物表示与具有纵向增强的学习表示进行比较时,在预测十种不同认知评分方面,我们取得了明显的性能提升。我们进一步观察到,我们的新方法选择的前几个生物标志物与 AD 研究中的已知知识一致。这些有希望的结果证明了我们的新方法的改进性能,验证了其有效性。