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N-乙酰-7-硝基吲哚核苷衍生物的合成、其在 DNA 寡聚物中的掺入以及在 DNA/RNA 双链体中光反应性的评价。

Synthesis of Nucleoside Derivatives of N-Acetyl-7-nitroindoline, Their Incorporation into the DNA Oligomer, and Evaluation of Their Photoreactivity in the DNA/RNA Duplex.

机构信息

Graduate School of Pharmaceutical Sciences, Kyushu University.

Graduate School of Pharmaceutical Sciences, Nagasaki International University.

出版信息

Chem Pharm Bull (Tokyo). 2020;68(12):1210-1219. doi: 10.1248/cpb.c20-00594.

DOI:10.1248/cpb.c20-00594
PMID:33268653
Abstract

N-Acetyl-7-nitroindoline has a characteristic reaction in that its acetyl group is photo-activated to acetylate amines to form amides. In this study, the N-acetyl-7-nitroindoline part was connected to the 2'-deoxyribose part at the 3- or 5-position or to a glycerol unit at the 3-position through an ethylene linker (1, 2, and 3, respectively). They were incorporated into the oligodeoxynucleotides, and their photo-reactivities toward the complementary RNA were evaluated. The acetyl group of 1 was photo-activated to form the deacelylated nitroso derivative without affecting the RNA strand. The photoreaction with 2 suggested acetylation of the RNA strand. In contrast, compound 3 formed the photo-cross-linked adduct with the RNA. These results have shown the potential application of N-acetyl-7-nitroindoline unit in aqueous solutions.

摘要

N-乙酰-7-硝基吲哚啉具有一个特征反应,其乙酰基在光照下被激活,从而酰化胺形成酰胺。在本研究中,N-乙酰-7-硝基吲哚啉部分通过乙烯连接体分别连接到 2'-脱氧核糖部分的 3-或 5-位,或者连接到甘油单元的 3-位(分别为 1、2 和 3)。它们被掺入寡脱氧核苷酸中,并评估了它们对互补 RNA 的光反应性。1 的乙酰基在光照下被激活,形成去乙酰化的亚硝酮衍生物,而不影响 RNA 链。与 2 的光反应表明 RNA 链的乙酰化。相比之下,化合物 3 与 RNA 形成光交联加合物。这些结果表明 N-乙酰-7-硝基吲哚啉单元在水溶液中的潜在应用。

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