Graduate Program of Marine Biology, College of Charleston, 205 Fort Johnson Rd, Charleston, SC 29412, USA.
Department of Biochemistry and Molecular Biology, Medical University of South Carolina, 171 Ashley Ave, Charleston, SC 29425, USA; Marine Biomedicine and Environmental Sciences Center, Medical University of South Carolina, 331 Fort Johnson Rd, Charleston, SC 29412, USA; Department of Life Sciences and Biotechnology, University of Ferrara, via L. Borsari 46, Ferrara 44121, Italy.
Comp Biochem Physiol C Toxicol Pharmacol. 2021 Apr;242:108946. doi: 10.1016/j.cbpc.2020.108946. Epub 2020 Dec 4.
An 8X15k oligonucleotide microarray was developed consisting of 2334 Eubalaena glacialis probes and 2166 Tursiops truncatus probes and used to measure the effects, at transcriptomic level, of cadmium exposure in right whale kidney fibroblast cells. Cells were exposed to three concentrations (1 μM, 0.1 μM, and 0.01 μM) of cadmium chloride (CdCl) for three exposure times (1, 4, and 24 h). Cells exposed to 1 μM CdCl for 4 h and 24 h showed upregulated genes involved in protection from metal toxicity and oxidative stress, protein renaturation, apoptosis inhibition, as well as several regulators of cellular processes. Downregulated genes represented a suite of functions including cell proliferation, transcription regulation, actin polymerization, and stress fiber synthesis. The collection of differentially expressed genes in this study support proposed mechanisms of cadmium-induced apoptosis such as ubiquitin proteasome system disruption, Ca homeostasis interference, mitochondrial membrane potential collapse, reactive oxygen species (ROS) production, and cell cycle arrest. The results also have confirmed the right whale microarray as a reproducible tool in measuring differentiated gene expression that could be a valuable asset for transcriptome analysis of other baleen whales and potential health assessment protocols.
开发了一种由 2334 个长须鲸探针和 2166 个白鲸探针组成的 8X15k 寡核苷酸微阵列,用于测量镉暴露在露脊鲸肾成纤维细胞中的转录组水平的影响。细胞暴露于三种浓度(1μM、0.1μM 和 0.01μM)的氯化镉(CdCl)中三个暴露时间(1、4 和 24 小时)。暴露于 1μM CdCl4 小时和 24 小时的细胞中,参与金属毒性和氧化应激保护、蛋白质复性、细胞凋亡抑制以及细胞过程几个调节剂的基因上调。下调的基因代表了一系列功能,包括细胞增殖、转录调节、肌动蛋白聚合和应激纤维合成。本研究中差异表达基因的集合支持镉诱导细胞凋亡的提出机制,如泛素蛋白酶体系统破坏、Ca 内稳态干扰、线粒体膜电位崩溃、活性氧(ROS)产生和细胞周期停滞。结果还证实了露脊鲸微阵列是测量分化基因表达的一种可靠工具,这对于其他须鲸的转录组分析和潜在的健康评估方案可能是一项有价值的资产。