Dunina-Barkovskaya A Ya, Vishnyakova Kh S
Belozersky Institute of Physico-chemical Biology, Moscow Lomonosov State University, 119992 Moscow, Russia.
Engelgardt Institute of Molecular Biology, Russian Academy of Sciences, 119191 Moscow, Russia.
Biochem (Mosc) Suppl Ser A Membr Cell Biol. 2020;14(4):331-343. doi: 10.1134/S1990747820040054. Epub 2020 Dec 2.
The activity of many membrane proteins, such as receptors, ionic channels, transporters, and enzymes, is cholesterol dependent; however, mechanisms of the cholesterol-dependent regulation of protein functions remain obscure. Recent studies suggest that membrane proteins can directly interact with cholesterol owing to the presence of the cholesterol-recognizing amino-acid consensus (CRAC) motifs. One of the ways to verify and further develop this notion is a design of CRAC-containing peptides and investigation of their effects on cholesterol-dependent cell functions. Previously we showed that a newly constructed peptide TKLEMLELGNMDKAKLRKLR (peptide P4) containing two CRAC motifs modulates cholesterol-dependent interactions of cultured macrophages IC-21 with 2-μm particles. In this work, in order to clarify the role of CRAC-forming amino acids, we employed the same experimental system to test the activity of peptides closely related to P4 but with modified CRAC motifs. We found that peptide TKLEMLELGNMDKAKLRKLR (Mut2) analogous to P4, except that all CRAC-forming amino acids (V, W, K/R) were substituted by serine, did not produce any effect in the concentration range 0.5-50 μM corresponding to the range of the P4 activity. Neither was effective peptide TKLEMLELGNMDKAKLRKLR (Mut3), in which only aromatic amino acids (W) of the CRAC motifs were substituted. Peptide TKLEMLELGNMDKAKLRKLR (Mut4), in which only cationic amino acids (R/K) in the CRAC motifs were changed, produced almost the same effect as that of peptide P4 with a bell-shape dose-response curve. At low concentrations (1-4 μM) Mut4 notably increased the number of beads per cell, at higher concentrations this parameter diminished, and at 50 μM Mut4 produced a robust toxic effect. Finally, peptide EWGMALENRKLKKDLKVLKMLRT (Mut1) composed of the same amino acid residues as P4 but in a random order ("scramble") and possessing one CRAC motif, different from that in P4, produced a moderate stimulation at 4-10 μM but was not toxic at 50 μM. As in the case of peptide P4, the effects of Mut4 and Mut1 depended on the cholesterol content in the cell membrane: after the incubation of cells with cholesterol-extracting agent methyl-β-cyclodextrin stimulatory effects produced by Mut4 and Mut1 at low doses were suppressed. Our results indicate that CRAC motifs play an important role in the mechanisms of the peptide-induced modulations of cholesterol-dependent cell functions in the experimental system used and that of the three motif-forming amino acids, critical is the presence of the aromatic amino acid (W). Further research is required to comprehend the molecular mechanisms of interactions of CRAC-containing peptides with cell membrane components that lead to modulation of cell functions. We anticipate that CRAC-containing peptides may provide a basis for the development of new tools for directed regulation of the activity of target cholesterol-dependent membrane proteins and for the design of new antimicrobial and immunomodulating drugs in particular.
许多膜蛋白,如受体、离子通道、转运蛋白和酶,其活性依赖于胆固醇;然而,胆固醇依赖性调节蛋白功能的机制仍不清楚。最近的研究表明,由于存在胆固醇识别氨基酸共识(CRAC)基序,膜蛋白可直接与胆固醇相互作用。验证并进一步发展这一概念的方法之一是设计含CRAC的肽,并研究其对胆固醇依赖性细胞功能的影响。此前我们发现,新构建的含有两个CRAC基序的肽TKLEMLELGNMDKAKLRKLR(肽P4)可调节培养的巨噬细胞IC-21与2μm颗粒的胆固醇依赖性相互作用。在这项工作中,为了阐明形成CRAC的氨基酸的作用,我们采用相同的实验系统来测试与P4密切相关但具有修饰CRAC基序的肽的活性。我们发现,与P4类似的肽TKLEMLELGNMDKAKLRKLR(Mut2),除了所有形成CRAC的氨基酸(V、W、K/R)都被丝氨酸取代外,在0.5 - 50μM的浓度范围内(对应于P4的活性范围)没有产生任何影响。同样无效的是肽TKLEMLELGNMDKAKLRKLR(Mut3),其中CRAC基序中只有芳香族氨基酸(W)被取代。肽TKLEMLELGNMDKAKLRKLR(Mut4),其中CRAC基序中只有阳离子氨基酸(R/K)被改变,产生了与肽P4几乎相同的效果,具有钟形剂量反应曲线。在低浓度(1 - 4μM)时,Mut4显著增加了每个细胞的珠子数量,在较高浓度时该参数降低,在50μM时Mut4产生了强烈的毒性作用。最后,由与P4相同的氨基酸残基组成但顺序随机(“打乱”)且具有一个与P4不同的CRAC基序的肽EWGMALENRKLKKDLKVLKMLRT(Mut1),在4 - 10μM时产生适度刺激,但在50μM时无毒。与肽P4的情况一样,Mut4和Mut1的作用取决于细胞膜中的胆固醇含量:在用胆固醇提取剂甲基-β-环糊精孵育细胞后,Mut4和Mut1在低剂量下产生的刺激作用被抑制。我们的结果表明,在所用的实验系统中,CRAC基序在肽诱导的胆固醇依赖性细胞功能调节机制中起重要作用,并且在形成基序的三个氨基酸中,关键的是芳香族氨基酸(W)的存在。需要进一步研究以理解含CRAC的肽与细胞膜成分相互作用导致细胞功能调节的分子机制。我们预计含CRAC的肽可能为开发用于定向调节靶胆固醇依赖性膜蛋白活性的新工具提供基础,特别是用于设计新的抗菌和免疫调节药物。