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从韦荣氏球菌中纯化、鉴定 YhdA 型偶氮还原酶及其晶体结构。

Purification, characterization, and crystal structure of YhdA-type azoreductase from Bacillus velezensis.

机构信息

Director's Research Cell, CSIR-NEERI (National Environmental Engineering Research Institute), Nagpur, India.

Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India.

出版信息

Proteins. 2021 May;89(5):483-492. doi: 10.1002/prot.26032. Epub 2020 Dec 9.

Abstract

Azoreductases are being extensively investigated for their ability to initiate degradation of recalcitrant azo dyes through reduction of azo bonds. There is great interest in studying their diversity, structure, and function to facilitate better understanding and effective application. Current study reports azoreductase enzyme from Bacillus velezensis, which showed 69.5% identity to the Bacillus subtilis azoreductase YhdA. The enzyme was homotetrameric and molecular weight of each subunit was 20 kDa. It decolorized azo dyes with different structures. The V for decolorization of congo red, methyl orange and methyl red was 14.7, 28.6, and 77.9 nmol/min/mg, respectively. The enzyme contained FMN as cofactor and used NADPH as the favored co-substrate. It was oxygen-insensitive, but the presence of reducing agents enhanced its activity, which is a new finding. The azoreductase expression in B. velezensis was found to be unaffected by addition of azo dyes, although azo dyes are known to induce azoreductase expression in few organisms. The enzyme was thermostable with melting temperature of 89.5°C and functioned in wide temperature range. Further, the enzyme was crystallized and its structure was solved. The structural basis of its functional attributes is discussed. In our knowledge, this is the first report on characterization of azoreductase enzyme from B. velezensis.

摘要

脎还原酶因其能够通过还原偶氮键来启动对难降解偶氮染料的降解而受到广泛研究。研究其多样性、结构和功能以促进更好的理解和有效应用具有很大的意义。本研究报告了来自解淀粉芽孢杆菌的脎还原酶,其与枯草芽孢杆菌的脎还原酶 YhdA 具有 69.5%的同源性。该酶为同源四聚体,每个亚基的分子量为 20kDa。它可以使具有不同结构的偶氮染料脱色。刚果红、甲基橙和甲基红的 V 值(单位时间内酶促反应底物减少量)分别为 14.7、28.6 和 77.9 nmol/min/mg。该酶含有 FMN 作为辅酶,并使用 NADPH 作为首选辅底物。它对氧气不敏感,但还原剂的存在会增强其活性,这是一个新的发现。尽管偶氮染料已知在少数生物中诱导脎还原酶的表达,但在解淀粉芽孢杆菌中添加偶氮染料并不影响脎还原酶的表达。该酶具有热稳定性,熔点为 89.5°C,在较宽的温度范围内发挥作用。此外,该酶已被结晶并解析了其结构。讨论了其功能属性的结构基础。据我们所知,这是首次报道解淀粉芽孢杆菌脎还原酶的特性。

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