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胎儿酒精谱系障碍儿童的表观遗传时钟分析。

Epigenetic Clock Analysis in Children With Fetal Alcohol Spectrum Disorder.

机构信息

From, Department of Psychiatry, (SO, IO, YS, THo, THi, NY, IS, AH), Kobe University Graduate School of Medicine, Kobe, Japan.

Department of Psychiatry, (AH), Yokohama City University Graduate School of Medicine, Yokohama, Japan.

出版信息

Alcohol Clin Exp Res. 2021 Feb;45(2):329-337. doi: 10.1111/acer.14532. Epub 2021 Jan 22.

Abstract

BACKGROUND

Fetal alcohol spectrum disorder (FASD) is characterized by severe clinical impairment, considerable social burden, and high mortality and morbidity, which are due to various malformations, sepsis, and cancer. As >50% of deaths from FASD occur during the first year of life, we hypothesized that there is the acceleration of biological aging in FASD. Several recent studies have established genome-wide DNA methylation (DNAm) profiles as "epigenetic clocks" that can estimate biological aging, and FASD has been associated with differential DNAm patterns. Therefore, we tested this hypothesis using epigenetic clocks.

METHODS

We investigated 5 DNAm-based measures of epigenetic age (HorvathAge, HannumAge, SkinBloodAge, PhenoAge, and GrimAge) and telomere length (DNAmTL) using 4 independent publicly available DNAm datasets; 2 datasets were derived from buccal epithelium, and the other 2 datasets were derived from peripheral blood.

RESULTS

Compared with controls, children with FASD exhibited an acceleration of GrimAge in 1 buccal and 2 blood datasets. No significant difference was found in other DNAm ages and DNAmTL. Meta-analyses showed a significant acceleration of GrimAge in the blood samples but not in the buccal samples.

CONCLUSIONS

This study provides novel evidence regarding accelerated epigenetic aging in children with FASD.

摘要

背景

胎儿酒精谱系障碍(FASD)的特点是严重的临床损伤、相当大的社会负担以及高死亡率和发病率,这是由于各种畸形、败血症和癌症造成的。由于 FASD 导致的 50%以上的死亡发生在生命的第一年,我们假设 FASD 存在生物衰老加速的现象。最近的几项研究已经确定了全基因组 DNA 甲基化(DNAm)图谱作为“表观遗传时钟”,可以估计生物年龄,并且 FASD 与差异 DNAm 模式有关。因此,我们使用表观遗传时钟来检验这一假设。

方法

我们使用 4 个独立的公开可用的 DNAm 数据集,研究了 5 个基于 DNAm 的表观遗传年龄(HorvathAge、HannumAge、SkinBloodAge、PhenoAge 和 GrimAge)和端粒长度(DNAmTL)的指标;其中 2 个数据集来自口腔上皮,另外 2 个数据集来自外周血。

结果

与对照组相比,患有 FASD 的儿童在 1 个口腔和 2 个血液数据集的 GrimAge 加速。其他 DNAm 年龄和 DNAmTL 没有显著差异。荟萃分析显示,血液样本中的 GrimAge 明显加速,但口腔样本中没有。

结论

本研究为 FASD 儿童的表观遗传衰老加速提供了新的证据。

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