• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

在BW25113中鉴定二氢二醇脱氢酶的策略。

Strategy for identification of -dihydrodiendiol-degrading dehydrogenases in BW25113.

作者信息

Wissner Julian L, Ludwig Julian, Escobedo-Hinojosa Wendy, Hauer Bernhard

机构信息

Institute of Technical Biochemistry, University of Stuttgart, Allmandring 31, 70569 Stuttgart, Germany.

出版信息

MethodsX. 2020 Nov 13;7:101143. doi: 10.1016/j.mex.2020.101143. eCollection 2020.

DOI:10.1016/j.mex.2020.101143
PMID:33299804
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7704418/
Abstract

-Dihydrodiendiols are valuable compounds, finding multiple application as chiral synthons in organic chemistry. The biotechnological route for the generation of -dihydrodiendiols involves the dihydroxylation of aromatic compounds, catalyzed by Rieske non-heme iron dioxygenases. To date, numerous examples of recombinant , harboring such dioxygenases, can be found in the literature. Nevertheless, there is only a minor number of publications, addressing the catalyzed degradation of -dihydrodiendiols into catechols dehydrogenases. Identification and elimination of such dehydrogenase catalyzed degradation is key for the establishment of enhanced recombinant platforms pursuing the production of -dihydrodiendiols. Here, we provide a fast and easy strategy for the identification of promiscuous alcohol dehydrogenases in BW25113, catalyzing the degradation of -dihydrodiendiols into catechols. This approach is based on the screening of dehydrogenase deficient KEIO strains, regarding their incapability of degrading a -dihydrodiendiol of choice.•Novel screening strategy for BW25113 dehydrogenase knock-outs, incapable of degrading -dihydrodiendiols was validated for -1,2-dihydrocatechol as substrate•Corresponding knock-outs can be used for recombinant production of -dihydrodiendiols•Simple analysis based on liquid chromatography with diode array detector (HPLC-DAD).

摘要

-二氢二醇是有价值的化合物,在有机化学中作为手性合成子有多种应用。生成-二氢二醇的生物技术路线涉及芳香族化合物的二羟基化反应,由 Rieske 非血红素铁双加氧酶催化。迄今为止,文献中可以找到许多携带此类双加氧酶的重组体的例子。然而,仅有少数出版物涉及-二氢二醇被脱氢酶催化降解为儿茶酚的情况。识别并消除这种脱氢酶催化的降解对于建立旨在生产-二氢二醇的增强型重组平台至关重要。在此,我们提供了一种快速简便的策略,用于鉴定大肠杆菌 BW25113 中催化-二氢二醇降解为儿茶酚的混杂醇脱氢酶。该方法基于对脱氢酶缺陷型 KEIO 菌株的筛选,考察它们降解所选-二氢二醇的能力。•针对以-1,2-二氢儿茶酚为底物,验证了大肠杆菌 BW25113 脱氢酶敲除体不能降解-二氢二醇的新型筛选策略•相应的敲除体可用于重组生产-二氢二醇•基于配备二极管阵列检测器的液相色谱法(HPLC-DAD)进行简单分析。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9122/7704418/5ef5ed3951ac/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9122/7704418/fa1bc5336c6b/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9122/7704418/4a2d473b2ab1/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9122/7704418/5ef5ed3951ac/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9122/7704418/fa1bc5336c6b/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9122/7704418/4a2d473b2ab1/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9122/7704418/5ef5ed3951ac/gr2.jpg

相似文献

1
Strategy for identification of -dihydrodiendiol-degrading dehydrogenases in BW25113.在BW25113中鉴定二氢二醇脱氢酶的策略。
MethodsX. 2020 Nov 13;7:101143. doi: 10.1016/j.mex.2020.101143. eCollection 2020.
2
An enhanced toluene dioxygenase platform for the production of cis-1,2-dihydrocatechol in Escherichia coli BW25113 lacking glycerol dehydrogenase activity.增强型甲苯双加氧酶平台在缺乏甘油脱氢酶活性的大肠杆菌 BW25113 中生产顺-1,2-二羟环己烷。
J Biotechnol. 2021 Jan 10;325:380-388. doi: 10.1016/j.jbiotec.2020.09.012. Epub 2020 Sep 15.
3
Exploring the substrate scope of glycerol dehydrogenase GldA from E. coli BW25113 towards cis-dihydrocatechol derivatives.探索大肠杆菌 BW25113 甘油脱氢酶 GldA 对顺式二氢邻苯二酚衍生物的底物范围。
J Biotechnol. 2023 Mar 20;366:19-24. doi: 10.1016/j.jbiotec.2023.02.010. Epub 2023 Mar 2.
4
Assembly of a Rieske non-heme iron oxygenase multicomponent system from Phenylobacterium immobile E DSM 1986 enables pyrazon cis-dihydroxylation in E. coli.来自不动苯基杆菌E DSM 1986的 Rieske非血红素铁加氧酶多组分系统的组装能够在大肠杆菌中实现吡草酮顺式二羟基化。
Appl Microbiol Biotechnol. 2021 Mar;105(5):2003-2015. doi: 10.1007/s00253-021-11129-w. Epub 2021 Feb 13.
5
Degradation mechanism of biphenyl and 4-4'-dichlorobiphenyl cis-dihydroxylation by non-heme 2,3 dioxygenases BphA: A QM/MM approach.非血红素 2,3 加氧酶 BphA 催化联苯和 4,4'-二氯联苯顺式二羟基化的降解机制:QM/MM 方法。
Chemosphere. 2020 May;247:125844. doi: 10.1016/j.chemosphere.2020.125844. Epub 2020 Jan 6.
6
An engineered toluene dioxygenase for a single step biocatalytical production of (-)-(1S,2R)-cis-1,2-dihydro-1,2-naphthalenediol.用于一步生物催化生产(-)-(1S,2R)-顺式-1,2-二氢-1,2-萘二醇的工程化甲苯双加氧酶。
J Biotechnol. 2021 Jan 20;326:37-39. doi: 10.1016/j.jbiotec.2020.12.007. Epub 2020 Dec 28.
7
A simple and efficient method for lyophilization of recombinant JM109 (DE3) whole-cells harboring active Rieske non-heme iron dioxygenases.一种用于冻干含有活性 Rieske 非血红素铁双加氧酶的重组 JM109 (DE3) 全细胞的简单高效方法。
MethodsX. 2021 Mar 27;8:101323. doi: 10.1016/j.mex.2021.101323. eCollection 2021.
8
Methods for the detection and analysis of dioxygenase catalyzed dihydroxylation in mutant derived libraries.检测和分析突变衍生文库中双加氧酶催化的二羟基化的方法。
Methods Enzymol. 2020;644:63-93. doi: 10.1016/bs.mie.2020.04.022. Epub 2020 May 5.
9
Olefin cis-dihydroxylation versus epoxidation by non-heme iron catalysts: two faces of an Fe(III)-OOH coin.非血红素铁催化剂催化烯烃顺式二羟基化与环氧化反应:Fe(III)-OOH的两面性
J Am Chem Soc. 2002 Mar 27;124(12):3026-35. doi: 10.1021/ja0120025.
10
Rate-Determining Attack on Substrate Precedes Rieske Cluster Oxidation during Cis-Dihydroxylation by Benzoate Dioxygenase.在苯甲酸双加氧酶催化的顺式二羟基化反应中,对底物的速率决定攻击先于 Rieske 簇氧化。
Biochemistry. 2015 Aug 4;54(30):4652-64. doi: 10.1021/acs.biochem.5b00573. Epub 2015 Jul 21.

本文引用的文献

1
An enhanced toluene dioxygenase platform for the production of cis-1,2-dihydrocatechol in Escherichia coli BW25113 lacking glycerol dehydrogenase activity.增强型甲苯双加氧酶平台在缺乏甘油脱氢酶活性的大肠杆菌 BW25113 中生产顺-1,2-二羟环己烷。
J Biotechnol. 2021 Jan 10;325:380-388. doi: 10.1016/j.jbiotec.2020.09.012. Epub 2020 Sep 15.
2
Methods for the detection and analysis of dioxygenase catalyzed dihydroxylation in mutant derived libraries.检测和分析突变衍生文库中双加氧酶催化的二羟基化的方法。
Methods Enzymol. 2020;644:63-93. doi: 10.1016/bs.mie.2020.04.022. Epub 2020 May 5.
3
The Essential Genome of K-12.
K-12 的必需基因组。
mBio. 2018 Feb 20;9(1):e02096-17. doi: 10.1128/mBio.02096-17.
4
A diversity-oriented synthesis of bicyclic cis-dihydroarenediols, cis-4-hydroxyscytalones, and bicyclic conduritol analogues.双环顺式二氢苯二酚、顺式-4-羟基裂环异落叶松脂素和双环康醇类似物的导向合成多样性。
Org Lett. 2010 Jun 4;12(11):2472-5. doi: 10.1021/ol100557f.
5
Determination of antibiotic hypersensitivity among 4,000 single-gene-knockout mutants of Escherichia coli.对4000株大肠杆菌单基因敲除突变体进行抗生素超敏反应测定。
J Bacteriol. 2008 Sep;190(17):5981-8. doi: 10.1128/JB.01982-07. Epub 2008 Jul 11.
6
A concise and flexible synthesis of the potent anti-influenza agents tamiflu and tamiphosphor.强效抗流感药物达菲和磷酸奥司他韦的简洁灵活合成方法。
Angew Chem Int Ed Engl. 2008;47(31):5788-91. doi: 10.1002/anie.200801959.
7
Microbial transformation of benzene to cis-3,5-cyclohexadien-1,2-diols by recombinant bacteria harboring toluene dioxygenase gene tod.通过携带甲苯双加氧酶基因tod的重组细菌将苯微生物转化为顺式-3,5-环己二烯-1,2-二醇。
Appl Microbiol Biotechnol. 2007 Feb;74(1):43-9. doi: 10.1007/s00253-006-0637-6. Epub 2006 Oct 5.
8
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection.大肠杆菌K-12框内单基因敲除突变体的构建:Keio文库。
Mol Syst Biol. 2006;2:2006.0008. doi: 10.1038/msb4100050. Epub 2006 Feb 21.
9
Characterization of the hca cluster encoding the dioxygenolytic pathway for initial catabolism of 3-phenylpropionic acid in Escherichia coli K-12.编码大肠杆菌K-12中3-苯丙酸初始分解代谢双加氧途径的hca基因簇的特性分析
J Bacteriol. 1998 Jun;180(11):2915-23. doi: 10.1128/JB.180.11.2915-2923.1998.
10
Mechanistic studies on trans-2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (Ent A) in the biosynthesis of the iron chelator enterobactin.
Biochemistry. 1990 Jul 24;29(29):6789-98. doi: 10.1021/bi00481a006.