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对 PB2 基因中同时存在 I283M 和 K526R 组合突变的 H5N8 亚型禽流感病毒感染的鼠肺转录组进行深度测序。

Deep sequencing of the transcriptome from murine lung infected with H5N8 subtype avian influenza virus with combined substitutions I283M and K526R in PB2 gene.

机构信息

College of Veterinary Medicine, Yangzhou University, Jiangsu Co-Innovation Center for the Prevention and Control of Important Animal Infectious Disease and Zoonoses, Yangzhou, Jiangsu 225009, PR China; Joint International Research Laboratory of Agriculture and Agri-Product Safety, The Ministry of Education of China, Yangzhou, Jiangsu 225009, PR China; Jiangsu Research Centre of Engineering and Technology for Prevention and Control of Poultry Disease, Yangzhou, Jiangsu 225009, PR China.

College of Veterinary Medicine, Yangzhou University, Jiangsu Co-Innovation Center for the Prevention and Control of Important Animal Infectious Disease and Zoonoses, Yangzhou, Jiangsu 225009, PR China; Joint International Research Laboratory of Agriculture and Agri-Product Safety, The Ministry of Education of China, Yangzhou, Jiangsu 225009, PR China; Jiangsu Research Centre of Engineering and Technology for Prevention and Control of Poultry Disease, Yangzhou, Jiangsu 225009, PR China.

出版信息

Infect Genet Evol. 2021 Jan;87:104672. doi: 10.1016/j.meegid.2020.104672. Epub 2020 Dec 9.

DOI:10.1016/j.meegid.2020.104672
PMID:33309772
Abstract

H5N8 subtype highly pathogenic avian influenza viruses (HPAIVs) pose a huge threat to poultry industry and general public health. Our previous study demonstrated that synergistic effect of 283M and 526R in PB2 gene was a critical factor for viral high pathogenicity in mammals. However, the potential pathogenic mechanism of the mutant virus is still unclear. Here, RNA-seq method was used to analyze the global host response of murine lungs after infecting with parental r-JY virus and JY-PB2-I283M-K526R mutant virus. We found that both amounts and the expression levels of host differentially expressed genes (DEGs) were higher in mutant virus-infected mice compared with the group of parental virus. Furthermore, the DEGs mainly related with innate immune response by GO and KEGG analysis. Especially, PB2-I283M-K526R mutation strongly induced a sharp expression of cytokine storm-related genes, including MX1, CXCL10, and IFN-γ, performed by qRT-PCR. We also found that PB2-I283M-K526R mutation accelerated the level of cell apoptosis by heat map analysis of apoptosis-related DEGs in lungs and apoptosis assay in vitro. Taken together, our data demonstrated that PB2-I283M-K526R of H5N8 subtype HPAIV exacerbated the innate immune response and the level of cell apoptosis, which might be a key pathogenic mechanism for the enhanced pathogenicity of mutants in mammals.

摘要

H5N8 亚型高致病性禽流感病毒(HPAIVs)对家禽业和公众健康构成巨大威胁。我们之前的研究表明,PB2 基因中的 283M 和 526R 的协同作用是病毒在哺乳动物中高致病性的关键因素。然而,突变病毒的潜在致病机制仍不清楚。在这里,我们使用 RNA-seq 方法分析了感染亲本 r-JY 病毒和 JY-PB2-I283M-K526R 突变病毒后小鼠肺部的宿主全基因组反应。我们发现,与亲本病毒感染组相比,突变病毒感染组的宿主差异表达基因(DEGs)数量和表达水平更高。此外,通过 GO 和 KEGG 分析,DEGs 主要与先天免疫反应有关。特别是,PB2-I283M-K526R 突变强烈诱导细胞因子风暴相关基因(包括 MX1、CXCL10 和 IFN-γ)的急剧表达,通过 qRT-PCR 进行验证。我们还发现,PB2-I283M-K526R 突变通过肺部细胞凋亡相关 DEGs 的热图分析和体外细胞凋亡实验加速了细胞凋亡水平。综上所述,我们的数据表明,H5N8 亚型 HPAIV 的 PB2-I283M-K526R 增强了先天免疫反应和细胞凋亡水平,这可能是突变体在哺乳动物中增强致病性的关键致病机制。

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