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细菌钠通道选择性过滤器电荷不对称添加后离子选择性的变化

Changes in Ion Selectivity Following the Asymmetrical Addition of Charge to the Selectivity Filter of Bacterial Sodium Channels.

作者信息

Fedorenko Olena A, Khovanov Igor A, Roberts Stephen K, Guardiani Carlo

机构信息

Division of Biomedical and Life Sciences, Lancaster University, Lancaster LA1 4YE, UK.

School of Engineering, University of Warwick, Coventry CV4 7AL, UK.

出版信息

Entropy (Basel). 2020 Dec 9;22(12):1390. doi: 10.3390/e22121390.

Abstract

Voltage-gated sodium channels (NaVs) play fundamental roles in eukaryotes, but their exceptional size hinders their structural resolution. Bacterial NaVs are simplified homologues of their eukaryotic counterparts, but their use as models of eukaryotic Na channels is limited by their homotetrameric structure at odds with the asymmetric Selectivity Filter (SF) of eukaryotic NaVs. This work aims at mimicking the SF of eukaryotic NaVs by engineering radial asymmetry into the SF of bacterial channels. This goal was pursued with two approaches: the co-expression of different monomers of the NaChBac bacterial channel to induce the random assembly of heterotetramers, and the concatenation of four bacterial monomers to form a concatemer that can be targeted by site-specific mutagenesis. Patch-clamp measurements and Molecular Dynamics simulations showed that an additional gating charge in the SF leads to a significant increase in Na and a modest increase in the Ca conductance in the NavMs concatemer in agreement with the behavior of the population of random heterotetramers with the highest proportion of channels with charge -5. We thus showed that charge, despite being important, is not the only determinant of conduction and selectivity, and we created new tools extending the use of bacterial channels as models of eukaryotic counterparts.

摘要

电压门控钠通道(NaV)在真核生物中发挥着重要作用,但其巨大的尺寸阻碍了对其结构的解析。细菌NaV是其真核对应物的简化同源物,但其作为真核钠通道模型的应用受到其同四聚体结构的限制,这种结构与真核NaV的不对称选择性过滤器(SF)不一致。这项工作旨在通过对细菌通道的SF进行径向不对称工程设计来模拟真核NaV的SF。通过两种方法实现了这一目标:共表达NaChBac细菌通道的不同单体以诱导异四聚体的随机组装,以及连接四个细菌单体以形成可通过位点特异性诱变进行靶向的串联体。膜片钳测量和分子动力学模拟表明,SF中额外的门控电荷导致NavMs串联体中Na电导显著增加,Ca电导适度增加,这与具有最高比例 -5电荷通道的随机异四聚体群体的行为一致。因此,我们表明电荷尽管很重要,但不是传导和选择性的唯一决定因素,并且我们创建了新工具,扩展了细菌通道作为真核对应物模型的应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1be9/7764494/7a6dbb9a72ab/entropy-22-01390-g001.jpg

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