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三唑类似物的计算机辅助建模、化合物在 DNA 回旋酶上的对接研究以及具有高效活性的新假设化合物的设计。

Computer-aided modeling of triazole analogues, docking studies of the compounds on DNA gyrase enzyme and design of new hypothetical compounds with efficient activities.

机构信息

Chemistry Department, Ahmadu Bello University, Zaria, Nigeria.

Chemistry Department, Baze University, Abuja, Nigeria.

出版信息

J Biomol Struct Dyn. 2022 Jun;40(9):4004-4020. doi: 10.1080/07391102.2020.1852963. Epub 2020 Dec 15.

Abstract

The increasing problem of multi-drug resistant-tuberculosis has focused attention on developing new drugs that are not only active against drug-resistant tuberculosis, but also shorten the lengthy therapy. Therefore, this work employs the application of modeling technique to predict the inhibition activities of some prominent compounds which been reported to be efficient against . To accomplish the purpose of this work, multiple regression and genetic function approximation were adopted to create the model. The established model was swayed with topological descriptors; MATS7s, SpMin4_Bhv, TDB3v and RDF70v. More also, interactions between the compounds and the target protein 'DNA gyrase' were evaluated molecular docking approach utilizing the PyRx and discovery studio simulation software. Based on the docking analysis, compound has the most noticeable binding affinity of -16.5 kcal/mol. Therefore, compound served as a reference structural template and insight to design fourteen novel hypothetical agents with more prominent anti-tubercular activities. More also, compound was observed with the highest activity among the designed compounds with a prominent binding affinity of -24.3 kcal/mol. Therefore, this research recommends , screening and pharmacokinetic properties to be carried out in order to determine the toxicity of the designed compounds.Communicated by Ramaswamy H. Sarma.

摘要

耐多药结核病问题日益严重,这促使人们关注开发新的药物。这些药物不仅对耐药结核病具有活性,而且还能缩短漫长的治疗时间。因此,本工作采用建模技术来预测一些已报道对 有效的突出化合物的抑制活性。为了实现本工作的目的,采用多元回归和遗传函数逼近来创建模型。所建立的模型受到拓扑描述符的影响,包括 MATS7s、SpMin4_Bhv、TDB3v 和 RDF70v。此外,还利用 PyRx 和 discovery studio 模拟软件的分子对接方法评估了化合物与靶蛋白“DNA 回旋酶”之间的相互作用。基于对接分析,化合物 具有最显著的结合亲和力为-16.5 kcal/mol。因此,化合物 被用作参考结构模板,并为设计具有更显著抗结核活性的 14 种新型假设药物提供了深入的见解。此外,在所设计的化合物中,化合物 表现出最高的活性,其结合亲和力为-24.3 kcal/mol。因此,本研究建议进行 筛选和药代动力学特性研究,以确定设计化合物的毒性。由 Ramaswamy H. Sarma 传达。

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