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可变剪接与无义介导的 mRNA 降解相偶联的观点。

Perspective in Alternative Splicing Coupled to Nonsense-Mediated mRNA Decay.

机构信息

Department of Human Genetics, Instituto Nacional de Saúde Doutor Ricardo Jorge, 1649-016 Lisboa, Portugal.

Faculty of Science, BioISI-Biosystems and Integrative Sciences Institute, University of Lisboa, 1749-016 Lisboa, Portugal.

出版信息

Int J Mol Sci. 2020 Dec 10;21(24):9424. doi: 10.3390/ijms21249424.

Abstract

Alternative splicing (AS) of precursor mRNA (pre-mRNA) is a cellular post-transcriptional process that generates protein isoform diversity. Nonsense-mediated RNA decay (NMD) is an mRNA surveillance pathway that recognizes and selectively degrades transcripts containing premature translation-termination codons (PTCs), thereby preventing the production of truncated proteins. Nevertheless, NMD also fine-tunes the gene expression of physiological mRNAs encoding full-length proteins. Interestingly, around one third of all AS events results in PTC-containing transcripts that undergo NMD. Numerous studies have reported a coordinated action between AS and NMD, in order to regulate the expression of several genes, especially those coding for RNA-binding proteins (RBPs). This coupling of AS to NMD (AS-NMD) is considered a gene expression tool that controls the ratio of productive to unproductive mRNA isoforms, ultimately degrading PTC-containing non-functional mRNAs. In this review, we focus on the mechanisms underlying AS-NMD, and how this regulatory process is able to control the homeostatic expression of numerous RBPs, including splicing factors, through auto- and cross-regulatory feedback loops. Furthermore, we discuss the importance of AS-NMD in the regulation of biological processes, such as cell differentiation. Finally, we analyze interesting recent data on the relevance of AS-NMD to human health, covering its potential roles in cancer and other disorders.

摘要

选择性剪接(AS)是前体 mRNA(pre-mRNA)的一种细胞转录后过程,可产生蛋白质同工型多样性。无意义介导的 RNA 降解(NMD)是一种 mRNA 监控途径,可识别并选择性地降解含有过早翻译终止密码子(PTC)的转录本,从而防止截短蛋白的产生。然而,NMD 也微调了编码全长蛋白质的生理 mRNA 的基因表达。有趣的是,大约三分之一的所有 AS 事件都会导致含有 PTC 的转录本发生 NMD。许多研究报告称,AS 和 NMD 之间存在协调作用,以调节几个基因的表达,特别是那些编码 RNA 结合蛋白(RBPs)的基因。这种 AS 与 NMD 的偶联(AS-NMD)被认为是一种基因表达工具,可控制有功能和无功能 mRNA 同工型的比例,最终降解含有 PTC 的无功能 mRNAs。在这篇综述中,我们重点介绍 AS-NMD 的机制,以及这种调节过程如何通过自动和交叉调节反馈环来控制众多 RBPs(包括剪接因子)的稳态表达。此外,我们讨论了 AS-NMD 在细胞分化等生物过程调节中的重要性。最后,我们分析了 AS-NMD 与人类健康相关的有趣的最新数据,涵盖了它在癌症和其他疾病中的潜在作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5e0a/7764535/588616cf920c/ijms-21-09424-g001.jpg

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