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转录因子 ZEB1 和 CREB 促进牛 5 基因的转录。

Transcription Factors ZEB1 and CREB Promote the Transcription of Bovine 5 Gene.

机构信息

College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China.

National Beef Cattle Improvement Center, Northwest A&F University, Yangling, Shaanxi, China.

出版信息

DNA Cell Biol. 2021 Feb;40(2):219-230. doi: 10.1089/dna.2020.5994. Epub 2020 Dec 17.

Abstract

Alpha/beta hydrolase domain 5 (ABHD5) plays a significant role in intracellular lipid metabolism, which is regulated by a complex network of transcription factors. The transcriptional regulation of the 5 gene in cattle and other livestock, however, has not been previously investigated. Investigations in humans and animal models indicate that the transcription factors zinc finger E-box binding homeobox 1 (ZEB1) and cAMP-response element binding protein (CREB) may play important roles in the transcriptional regulation of 5 in cattle. Our comparison of the sequence similarities in the transcription factor binding sites in , , and revealed high homology. Based on the data collected by the Cistrome Data Browser and its visualization window, we found that ZEB1 and CREB have significant ChIP-seq enrichments in the 5'-untranslated region (5' UTR) of the human 5 gene. In bovine adipocytes, we detected ZEB1 and CREB binding sites in the 5 gene. Mutations in the ZEB1 and CREB binding sites significantly reduced the promoter activity ( < 0.05 and  < 0.01, respectively). Moreover, electrophoretic mobility shift assays and chromatin immunoprecipitation (ChIP) assays demonstrated the binding of the transcription factors and , respectively. And overexpression or silencing the expression of the ZEB1 and CREB, respectively, resulted in significant changes to the 5 promoter activity. Collectively, these results indicate that ZEB1 and CREB are important transcription factors that regulate 5 gene expression in bovine adipocytes. They further our understanding of the transcriptional regulation and biological functions of the bovine 5 gene.

摘要

α/β 水解酶结构域 5(ABHD5)在细胞内脂质代谢中发挥重要作用,其受到转录因子的复杂网络调控。然而,牛和其他家畜 5 基因的转录调控尚未得到研究。人类和动物模型的研究表明,转录因子锌指 E 盒结合同源盒 1(ZEB1)和 cAMP 反应元件结合蛋白(CREB)可能在牛 5 基因的转录调控中发挥重要作用。我们比较了 、 、 和 转录因子结合位点的序列相似性,发现它们具有高度同源性。基于 Cistrome Data Browser 及其可视化窗口收集的数据,我们发现 ZEB1 和 CREB 在人类 5 基因的 5'非翻译区(5'UTR)中具有显著的 ChIP-seq 富集。在牛脂肪细胞中,我们检测到 5 基因中有 ZEB1 和 CREB 结合位点。ZEB1 和 CREB 结合位点的突变显著降低了启动子活性(分别为 <0.05 和 <0.01)。此外,电泳迁移率变动分析和染色质免疫沉淀(ChIP)分析分别证明了转录因子 和 的结合。过表达或沉默 ZEB1 和 CREB 分别导致 5 启动子活性发生显著变化。总之,这些结果表明,ZEB1 和 CREB 是调节牛脂肪细胞中 5 基因表达的重要转录因子。它们进一步加深了我们对牛 5 基因转录调控和生物学功能的理解。

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