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全面评估胃肠道癌症中的 PD-L1 和 PD-L2 失调。

Comprehensive assessment of PD-L1 and PD-L2 dysregulation in gastrointestinal cancers.

机构信息

Clinical Medical Research Center, The Second Clinical Medical College of Jinan University, The First Affiliated Hospital of Southern University, Shenzhen People's Hospital, Shenzhen, Guangdong 518020, PR China.

Laboratory of Molecular Pharmacology, Department of Pharmacology, School of Pharmacy, Southwest Medical University, Luzhou, Sichuan, PR China.

出版信息

Epigenomics. 2020 Dec;12(24):2155-2171. doi: 10.2217/epi-2020-0093. Epub 2020 Dec 18.

Abstract

and are ligands of . Their overexpression has been reported in different cancers. However, the underlying mechanism of and dysregulation and their related signaling pathways are still unclear in gastrointestinal cancers. The expression of and were studied in The Cancer Genome Atlas and Genotype-Tissue Expression databases. The gene and protein alteration of and were analyzed in cBioportal. The direct transcription factor regulating / was determined with ChIP-seq data. The association of expression with clinicopathological parameters, survival, immune infiltration and tumor mutation burden were investigated with data from The Cancer Genome Atlas. Potential targets and pathways of and were determined by protein enrichment, WebGestalt and gene ontology. Comprehensive analysis revealed that and were significantly upregulated in most types of gastrointestinal cancers and their expressions were positively correlated. was a key transcription factor regulating the expression of . Higher or expression was significantly associated with poor overall survival, higher tumor mutation burden and more immune and stromal cell populations. Finally, HIF-1, ERBB and mTOR signaling pathways were most significantly affected by and dysregulation. Altogether, this study provided comprehensive analysis of the dysregulation of and , its underlying mechanism and downstream pathways, which add to the knowledge of manipulating for cancer immunotherapy.

摘要

和 是 的配体。它们在不同的癌症中过表达已有报道。然而,在胃肠道癌症中, 和 失调的潜在机制及其相关信号通路仍不清楚。在 The Cancer Genome Atlas 和 Genotype-Tissue Expression 数据库中研究了 的表达。在 cBioportal 中分析了 和 的基因和蛋白改变。利用 ChIP-seq 数据确定了直接调节 / 的转录因子。利用来自 The Cancer Genome Atlas 的数据研究了 表达与临床病理参数、生存、免疫浸润和肿瘤突变负荷的关系。通过蛋白质富集、WebGestalt 和基因本体论确定了 和 的潜在靶点和途径。综合分析表明, 和 在大多数类型的胃肠道癌症中显著上调,它们的表达呈正相关。 是调节 表达的关键转录因子。较高的 或 表达与总生存期较差、肿瘤突变负荷较高以及更多的免疫和基质细胞群体显著相关。最后,HIF-1、ERBB 和 mTOR 信号通路受到 和 失调的影响最为显著。总之,本研究对 和 的失调及其潜在机制和下游通路进行了全面分析,为癌症免疫治疗中操纵 提供了更多的知识。

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