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端粒结合蛋白 1 形成单个人类端粒的动力学。

Dynamics of TRF1 organizing a single human telomere.

机构信息

State Key Laboratory of Medicinal Chemical Biology, College of Pharmacy, Nankai University, 38 Tongyan Road, Tianjin 300350, China.

State Key Laboratory of Medicinal Chemical Biology, Department of Cell Biology and Genetics, College of Life Sciences, Nankai University, 94 Weijin Road, Tianjin 300071, China.

出版信息

Nucleic Acids Res. 2021 Jan 25;49(2):760-775. doi: 10.1093/nar/gkaa1222.

Abstract

Chromosome stability is primarily determined by telomere length. TRF1 is the core subunit of shelterin that plays a critical role in telomere organization and replication. However, the dynamics of TRF1 in scenarios of telomere-processing activities remain elusive. Using single-molecule magnetic tweezers, we here investigated the dynamics of TRF1 upon organizing a human telomere and the protein-DNA interactions at a moving telomeric fork. We first developed a method to obtain telomeres from human cells for directly measuring the telomere length by single-molecule force spectroscopy. Next, we examined the compaction and decompaction of a telomere by TRF1 dimers. TRF1 dissociates from a compacted telomere with heterogenous loops in ∼20 s. We also found a negative correlation between the number of telomeric loops and loop sizes. We further characterized the dynamics of TRF1 at a telomeric DNA fork. With binding energies of 11 kBT, TRF1 can modulate the forward and backward steps of DNA fork movements by 2-9 s at a critical force of F1/2, temporarily maintaining the telomeric fork open. Our results shed light on the mechanisms of how TRF1 organizes human telomeres and facilitates the efficient replication of telomeric DNA. Our work will help future research on the chemical biology of telomeres and shelterin-targeted drug discovery.

摘要

染色体稳定性主要取决于端粒长度。TRF1 是 shelterin 的核心亚基,在端粒的组织和复制中起着关键作用。然而,在端粒处理活动的情况下,TRF1 的动力学仍然难以捉摸。使用单分子磁镊,我们在此研究了 TRF1 在组织人类端粒时的动力学以及在移动端粒叉处的蛋白质-DNA 相互作用。我们首先开发了一种从人类细胞中获取端粒的方法,通过单分子力谱直接测量端粒长度。接下来,我们检查了 TRF1 二聚体对端粒的压缩和解压缩。TRF1 以约 20 秒的时间从紧凑的端粒中解离,具有异质环。我们还发现端粒环的数量与环的大小之间存在负相关。我们进一步表征了端粒 DNA 叉处的 TRF1 动力学。在 11 kBT 的结合能下,TRF1 可以通过在 F1/2 的关键力下将 DNA 叉运动的前进和后退步骤调制 2-9 秒,暂时保持端粒叉打开。我们的研究结果阐明了 TRF1 如何组织人类端粒并促进端粒 DNA 有效复制的机制。我们的工作将有助于未来对端粒和 shelterin 靶向药物发现的化学生物学的研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b244/7826288/20ec3b85ef9d/gkaa1222gra1.jpg

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