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氰化物与铜锌超氧化物歧化酶的结合。铜(II)、钴(II)衍生物的核磁共振研究。

Cyanide binding to Cu, Zn superoxide dismutase. An NMR study of the Cu(II), Co(II) derivative.

作者信息

Paci M, Desideri A, Rotilio G

机构信息

Department of Chemical Science and Technology, Tor Vergata University of Rome, Italy.

出版信息

J Biol Chem. 1988 Jan 5;263(1):162-6.

PMID:3335495
Abstract

The Cu,Co superoxide dismutase derivative, in which the native Zn(II) was replaced by Co(II), was investigated by 1H NMR spectroscopy at pH 7.0 in the presence of CN- and N-3. Addition of either anion produced large but remarkably different variations in the position of the histidine proton signals bound to the metal cluster. The resonances of the histidines bound to the copper broadened at low CN- concentrations (6 X10(-5)-16.5 X 10(-3) M KCN, in the presence of 1.5 mM protein) and narrowed again, with changed chemical shifts at [KCN] greater than 10(-2) M. At 7 degrees C two resonances split into two pairs of lines as a function of [CN-]. The temperature dependence of these resonances, in the presence of nonsaturating [CN-], suggests a slow exchange between two forms of the protein-bound copper in the presence of the anion. The apparent activation parameters associated with the interconversion of the two species indicate a local conformational change in the presence of CN-. No evidence of temperature dependence was seen in the spectrum in the presence of N-3, which, on the other hand, was fully removed from the copper by addition of CN-. No evidence was obtained for removal by CN- of a histidine bound to the copper as previously reported for low affinity anions at pH 5.5 (Bertini, I., Lanini, G., Luchinat, C., Messori, L., Monanni, R., and Scozzafava, A. (1985) J. Am. Chem. Soc. 107, 4391-4396). These results indicate that CN- has a unique pattern of binding to the enzyme copper. Since catalytic and structural data indicate that CN- is the only appropriate substrate analogue for the Cu,Zn superoxide dismutase, data from anions with much less affinity may lead to misleading conclusions on the mechanism of anion and substrate binding to the enzyme.

摘要

研究了用Co(II)取代天然Zn(II)的Cu,Co超氧化物歧化酶衍生物,在pH 7.0、存在CN-和N-3的条件下通过1H NMR光谱进行研究。添加任何一种阴离子都会使与金属簇结合的组氨酸质子信号的位置产生很大但明显不同的变化。在低CN-浓度(6×10(-5)-16.5×10(-3) M KCN,存在1.5 mM蛋白质)下,与铜结合的组氨酸的共振峰变宽,而在[KCN]大于10(-2) M时又变窄,化学位移发生变化。在7℃时,两个共振峰随着[CN-]的变化分裂成两对谱线。在存在非饱和[CN-]的情况下,这些共振峰的温度依赖性表明在阴离子存在下蛋白质结合铜的两种形式之间存在缓慢交换。与两种物种相互转化相关的表观活化参数表明在CN-存在下存在局部构象变化。在存在N-3的光谱中未观察到温度依赖性的证据,另一方面,通过添加CN-可将N-3从铜上完全去除。没有获得CN-如先前报道的在pH 5.5时低亲和力阴离子那样去除与铜结合的组氨酸的证据(贝尔蒂尼,I.,拉尼尼,G.,卢奇纳特,C.,梅索里,L.,莫南尼,R.,和斯科扎法瓦,A.(1985年)《美国化学会志》107,4391-4396)。这些结果表明CN-与酶铜具有独特的结合模式。由于催化和结构数据表明CN-是Cu,Zn超氧化物歧化酶唯一合适的底物类似物,来自亲和力低得多的阴离子的数据可能会导致关于阴离子和底物与酶结合机制的误导性结论。

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Assignment of imidazole resonances from two-dimensional proton NMR spectra of bovine Cu,Zn superoxide dismutase. Evidence for similar active site conformation in the oxidized and reduced enzyme.来自牛铜锌超氧化物歧化酶二维质子核磁共振谱中咪唑共振峰的归属。氧化态和还原态酶活性位点构象相似的证据。
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Differential binding of anions to the active site of Cu,Zn superoxide dismutase. A study of the Co,Zn enzyme derivative.
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Two-dimensional NMR assignment of hyperfine-shifted resonances of very fast relaxing metal binding sites of proteins by NOE spectroscopy. The case of Cu, Co superoxide dismutase.通过NOE光谱对蛋白质快速弛豫金属结合位点的超精细位移共振进行二维核磁共振归属。以铜、钴超氧化物歧化酶为例。
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