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来自北斐济海盆的热液喷口虾(十足目:真虾下目:阿尔文虾科)的完整线粒体基因组

Complete mitochondrial genome of the hydrothermal vent shrimp (Decapoda: Caridea: Alvinocarididae) from the North Fiji basin.

作者信息

Lee Won-Kyung, Kim Se-Joo, Ju Se-Jong, Hou Bo Kyeng

机构信息

Genome Editing Research Center, Korea Research Institute Bioscience and Biotechnology, Daejeon, Korea.

Global Ocean Research Center, Korea Institute of Ocean Science and Technology, Busan, Korea.

出版信息

Mitochondrial DNA B Resour. 2019 Oct 11;4(2):3475-3476. doi: 10.1080/23802359.2019.1674717.

DOI:10.1080/23802359.2019.1674717
PMID:33366046
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7707337/
Abstract

The family Alvinocarididae is the monophyletic taxon which lives restrictively at chemosynthesis-based environments in the deep-sea. Here, for the first time, we report the complete mitogenome of the alvinocaridid vent shrimp from the North Fiji Basin. The mitogenome was 15,909 bp in length, with 65.6% AT content. Its protein-coding gene organization was typical of other alvinocaridid shrimps. Based on the phylogenetic tree, was most closely related to , rather than with other species. To resolve this incongruence between traditional morphological classification and molecular analyses, further mitogenomic analysis of undetermined alvinocaridid taxa is necessary.

摘要

阿尔文虾科是一个单系分类群,仅生活在深海基于化学合成的环境中。在此,我们首次报告了来自北斐济海盆的阿尔文虾科热液口虾的完整线粒体基因组。该线粒体基因组长度为15,909 bp,AT含量为65.6%。其蛋白质编码基因组织是其他阿尔文虾科虾类的典型特征。基于系统发育树,它与[具体名称1]关系最为密切,而非与其他[具体名称2]物种。为了解决传统形态分类与分子分析之间的这种不一致,有必要对未确定的阿尔文虾科分类群进行进一步的线粒体基因组分析。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a288/7707337/e63bbdbed672/TMDN_A_1674717_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a288/7707337/e63bbdbed672/TMDN_A_1674717_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a288/7707337/e63bbdbed672/TMDN_A_1674717_F0001_C.jpg

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本文引用的文献

1
Complete mitochondrial genome of the deep-sea asymmetrical barnacle (Cirripedia, Thoracica, Verrucumorpha).深海不对称藤壶(蔓足亚纲,围胸目,疣藤壶科)的完整线粒体基因组
Mitochondrial DNA B Resour. 2017 Dec 8;2(2):934-935. doi: 10.1080/23802359.2017.1413297.
2
Phylogeny and New Classification of Hydrothermal Vent and Seep Shrimps of the Family Alvinocarididae (Decapoda).深海底栖热液口和冷泉虾类(十足目:阿文虾科)的系统发育与新分类
PLoS One. 2015 Jul 10;10(7):e0129975. doi: 10.1371/journal.pone.0129975. eCollection 2015.