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1856年考普氏海龙的完整线粒体基因组及系统发育分析

Complete mitochondrial genome and phylogenetic analysis of the Gray's pipefish Kaup 1856.

作者信息

Chen Jianzhen, Lai Mengru, Sun Siya, Zhang Guangji, Ge Yuqing, Cheng Rubin

机构信息

College of Pharmaceutical Science, Zhejiang Chinese Medical University, Hangzhou, Zhejiang, P. R. China.

The First Affiliated Hospital, Zhejiang Chinese Medical University, Hangzhou, Zhejiang, P. R. China.

出版信息

Mitochondrial DNA B Resour. 2019 Oct 24;4(2):3754-3755. doi: 10.1080/23802359.2019.1681915.

DOI:10.1080/23802359.2019.1681915
PMID:33366175
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7707414/
Abstract

In the present study, the complete mitochondrial genome of was determined and annotated. The circular mitogenome is 16,959 bp in length and contains 13 protein-coding genes (PCGs), two rRNA genes, 22 tRNA genes, and a control region. Most of the PCGs start with ATG, but begins with a GTG start codon. Phylogenetic analysis revealed that was strictly related to network pipefish with 100% bootstrap support value. This work provides basic molecular information that would be useful for further investigation on conservation genetics and evolutionary relationships of .

摘要

在本研究中,测定并注释了[物种名称]的完整线粒体基因组。该环状线粒体基因组长度为16,959 bp,包含13个蛋白质编码基因(PCGs)、两个rRNA基因、22个tRNA基因和一个控制区。大多数PCGs以ATG起始,但[某个基因]以GTG起始密码子开始。系统发育分析表明,[物种名称]与网纹海龙属鱼类严格相关,自展支持值为100%。这项工作提供了基础分子信息,将有助于进一步研究[物种名称]的保护遗传学和进化关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f4d/7707414/319bb215a01b/TMDN_A_1681915_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f4d/7707414/319bb215a01b/TMDN_A_1681915_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f4d/7707414/319bb215a01b/TMDN_A_1681915_F0001_B.jpg

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本文引用的文献

1
Characterization of the complete mitochondrial genome of the medical pipefish Bleeker 1850.1850年布莱克尔医用尖嘴鱼线粒体全基因组的特征分析
Mitochondrial DNA B Resour. 2018 Aug 17;3(2):881-883. doi: 10.1080/23802359.2018.1501303.
2
Systematic relationships of sympatric pipefishes (Syngnathus spp.): A mismatch between morphological and molecular variation.同域分布的海龙(Syngnathus spp.)的系统发育关系:形态变异与分子变异不匹配。
J Fish Biol. 2019 Oct;95(4):999-1012. doi: 10.1111/jfb.14073. Epub 2019 Sep 9.
3
Complete mitochondrial genomes of eight seahorses and pipefishes (Syngnathiformes: Syngnathidae): insight into the adaptive radiation of syngnathid fishes.
八张海马和海龙(海龙目:海龙科)的完整线粒体基因组:对海龙鱼类适应性辐射的深入了解。
BMC Evol Biol. 2019 Jun 11;19(1):119. doi: 10.1186/s12862-019-1430-3.
4
Identification of traditional Chinese medicinal pipefish and exclusion of common adulterants by multiplex PCR based on 12S sequences of specific alleles.基于特定等位基因12S序列的多重PCR技术鉴定中国传统药用管口鱼并排除常见掺假物
Mitochondrial DNA A DNA Mapp Seq Anal. 2018 Apr;29(3):340-346. doi: 10.1080/24701394.2016.1278538. Epub 2017 Jan 27.
5
The complete mitochondrial genome sequence of the network pipefish (Corythoichthys flavofasciatus) and the analyses of phylogenetic relationships within the Syngnathidae species.线纹尖鼻鱼(Corythoichthys flavofasciatus)的完整线粒体基因组序列及海龙科物种系统发育关系分析
Mar Genomics. 2015 Feb;19:59-64. doi: 10.1016/j.margen.2014.11.005. Epub 2014 Dec 9.
6
Conservation and management of seahorses and other Syngnathidae.海马和其他海龙科鱼类的保护与管理。
J Fish Biol. 2011 Jun;78(6):1681-724. doi: 10.1111/j.1095-8649.2011.03003.x.