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(等翅目:鼻白蚁科)的完整线粒体基因组。

The complete mitochondrial genome of (Isoptera: Rhinotermitidae).

作者信息

Ye Xin, Hu Yin, Chen Haihong, Liao Yiyuan, Chen Tong, Zhang Dayu

机构信息

College of Agricultural and Food Science, Zhejiang A & F University, Hangzhou, P. R. China.

National Termite Control Center, Hangzhou, P. R. China.

出版信息

Mitochondrial DNA B Resour. 2019 Nov 14;4(2):4063-4064. doi: 10.1080/23802359.2019.1688701.

DOI:10.1080/23802359.2019.1688701
PMID:33366319
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7707643/
Abstract

The mitochondrial genome of the contains 15,925 bp of nucleotide in length including 13 protein-coding genes, 22 transport RNAs, 2 ribosomal RNAs, and a non-coding region. The overall A + T among the genome sequence is 65.64%. The start codons of all protein-coding genes are ATN and the stop codon is TAA except TAG for Nad1 and incomplete T for COII and Nad5. The lengths of 12sRNA and 16sRNA genes are 743 and 1309 bp, respectively, and the control region was 1118 bp in length, with two repeating tandem regions. The phylogenetic tree revealed that and constituted a sister group to . The mitochondrial genome here provides a resource for evolution analysis within termites especially .

摘要

[物种名称]的线粒体基因组长度为15925个碱基对,包括13个蛋白质编码基因、22个转运RNA、2个核糖体RNA和一个非编码区。基因组序列中总的A+T含量为65.64%。所有蛋白质编码基因的起始密码子为ATN,终止密码子为TAA,但Nad1的终止密码子为TAG,COII和Nad5的终止密码子为不完全的T。12sRNA和16sRNA基因的长度分别为743和1309个碱基对,控制区长度为1118个碱基对,有两个串联重复区域。系统发育树显示,[物种名称1]和[物种名称2]构成了[物种名称3]的姐妹群。这里的线粒体基因组为白蚁尤其是[特定白蚁物种]的进化分析提供了资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8118/7707643/5b61d3e5fe44/TMDN_A_1688701_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8118/7707643/5b61d3e5fe44/TMDN_A_1688701_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8118/7707643/5b61d3e5fe44/TMDN_A_1688701_F0001_B.jpg

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本文引用的文献

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New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0.新算法和方法估计最大似然系统发育:评估 PhyML 3.0 的性能。
Syst Biol. 2010 May;59(3):307-21. doi: 10.1093/sysbio/syq010. Epub 2010 Mar 29.
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Biology of subterranean termites: insights from molecular studies of Reticulitermes and Coptotermes.地下白蚁生物学:来自网螱属和乳白蚁属分子研究的见解
Annu Rev Entomol. 2009;54:379-403. doi: 10.1146/annurev.ento.54.110807.090443.
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The phylogeny of termites (Dictyoptera: Isoptera) based on mitochondrial and nuclear markers: Implications for the evolution of the worker and pseudergate castes, and foraging behaviors.
基于线粒体和核标记的白蚁(蜚蠊目:等翅目)系统发育:对工蚁和拟工蚁品级进化以及觅食行为的影响
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