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一年生杂草(禾本科)完整质体基因组的表征及系统发育分析

Characterization and phylogenetic analysis of the complete plastome of (Gramineae), an annual weed.

作者信息

Guo Xiu-Xiu, Dai Chen, Wang Rong, Qu Xiao-Jian, Zhang Xue-Jie

机构信息

Key Lab of Plant Stress Research, College of Life Sciences, Shandong Normal University, Ji'nan, PR China.

出版信息

Mitochondrial DNA B Resour. 2020 Jan 7;5(1):396-397. doi: 10.1080/23802359.2019.1704189.

Abstract

is a weed in summer crop field, which is harmful to wheat crops. The complete plastome of was reported in this study. The genome was 136,408 bp in length, consisting of an 80,512 bp large single-copy region, a 12,836 bp small single-copy region, and two 21,530 bp inverted repeat regions. The GC content of this plastome was 38.3%. A total of 112 genes were annotated for the plastome of , containing 78 protein-coding genes (PCGs), 30 tRNAs, and 4 rRNAs. Phylogenetic analysis showed that was sister to .

摘要

是夏季作物田中的一种杂草,对小麦作物有害。本研究报道了其完整的质体基因组。该基因组长度为136,408 bp,由一个80,512 bp的大单拷贝区域、一个12,836 bp的小单拷贝区域和两个21,530 bp的反向重复区域组成。该质体基因组的GC含量为38.3%。总共为其质体基因组注释了112个基因,包括78个蛋白质编码基因(PCG)、30个tRNA和4个rRNA。系统发育分析表明与 是姐妹关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2adc/7748505/0faee4a2d1fd/TMDN_A_1704189_F0001_B.jpg

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