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(木兰科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of (Magnoliaceae).

作者信息

Wang Junqing, Li Peng, Mao Dongdong, Zhang Xiaomin, Wang Huan, Li Yanyan

机构信息

Chemical and Environmental Engineering College of Pingdingshan University, Pingdingshan University, Pingdingshan, Henan, P. R. China.

出版信息

Mitochondrial DNA B Resour. 2020 Jan 8;5(1):417-419. doi: 10.1080/23802359.2019.1703568.

Abstract

is an important afforestation and excellent broad-leaved tree species in southern China. In this study, we assembled the complete chloroplast genome of based on the Illumina sequences, sequence analysis showed the genome was 160,078 bp in length presenting a typical quadripartite structure and contains an inverted repeat region (IR, 26,467 b), a small single-copy (SSC) region, and a large single-copy (LSC) region (18,785 and 88,359 bp, respectively). The overall GC content was 39.27%. The sequence contained 128 unique genes, including 81 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The maximum-likelihood (ML) phylogenetic analysis revealed that was closely related to . A phylogenetic analysis revealed that is closely related to , with the genus .

摘要

是中国南方重要的造林和优良阔叶树种。在本研究中,我们基于Illumina序列组装了 的完整叶绿体基因组,序列分析表明该基因组长度为160,078 bp,呈现典型的四分体结构,包含一个反向重复区域(IR,26,467 bp)、一个小单拷贝(SSC)区域和一个大单拷贝(LSC)区域(分别为18,785和88,359 bp)。总体GC含量为39.27%。该序列包含128个独特基因,包括81个蛋白质编码基因、38个tRNA基因和8个rRNA基因。最大似然(ML)系统发育分析表明 与 密切相关。系统发育分析表明 与 密切相关,属于 属。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f55f/7748696/0164eaf9fa68/TMDN_A_1703568_F0001_B.jpg

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