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小檗科一种传统中草药(具体植物名称缺失)的完整叶绿体基因组。

The complete chloroplast genome of (Berberidaceae), a traditional Chinese medicinal herb.

作者信息

Yao Yu, Liu Xiang, Yang Qianru, Luo Yanjiao, Zhang Cheng, Xu Chaoqun, Suo Fengmei, Shen Guoan, Guo Baolin

机构信息

Institute of Medicinal Plant Development, Chinese Academy of Medical Science, Peking Union Medical College, Beijing, China.

Chongqing Academy of Chinese Materia Medica, Chongqing, China.

出版信息

Mitochondrial DNA B Resour. 2020 Jan 27;5(1):887-888. doi: 10.1080/23802359.2020.1718027.

Abstract

Epimedii Folium has been used as a common traditional Chinese medicine for more than 2000 years in China. In this study, we assembled the complete chloroplast (cp) genome of . The whole cp genome of is 158,658 bp in length, comprising a pair of inverted repeat (IR) regions (27,699 bp) separated by a large single copy (LSC) region (86,558 bp) and a small single copy (SSC) region (16,702bp). The cp genome contains 129 genes, of which 84 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis shows that . is closely clustered with , , and . The published chloroplast genome will provide useful information for the phylogenetic and evolutionary study on family of Berberidaceae.

摘要

淫羊藿在中国作为一种常见的传统中药已使用了2000多年。在本研究中,我们组装了……的完整叶绿体(cp)基因组。……的整个cp基因组长度为158,658 bp,由一对反向重复(IR)区域(27,699 bp)组成,这两个区域被一个大单拷贝(LSC)区域(86,558 bp)和一个小单拷贝(SSC)区域(16,702 bp)隔开。……的cp基因组包含129个基因,其中84个蛋白质编码基因、37个tRNA基因和8个rRNA基因。系统发育分析表明,……与……、……和……紧密聚类。已发表的……叶绿体基因组将为小檗科……属的系统发育和进化研究提供有用信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b468/7748714/b0b219922213/TMDN_A_1718027_F0001_B.jpg

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