Institut Jacques Monod, Université de Paris / CNRS, UMR7592, Paris, France.
Laboratoire Matière et Systèmes Complexes, Université de Paris / CNRS, UMR7057, Paris, France.
BMC Evol Biol. 2020 Dec 29;20(1):165. doi: 10.1186/s12862-020-01714-4.
How vascular systems and their respiratory pigments evolved is still debated. While many animals present a vascular system, hemoglobin exists as a blood pigment only in a few groups (vertebrates, annelids, a few arthropod and mollusk species). Hemoglobins are formed of globin sub-units, belonging to multigene families, in various multimeric assemblages. It was so far unclear whether hemoglobin families from different bilaterian groups had a common origin.
To unravel globin evolution in bilaterians, we studied the marine annelid Platynereis dumerilii, a species with a slow evolving genome. Platynereis exhibits a closed vascular system filled with extracellular hemoglobin. Platynereis genome and transcriptomes reveal a family of 19 globins, nine of which are predicted to be extracellular. Extracellular globins are produced by specialized cells lining the vessels of the segmental appendages of the worm, serving as gills, and thus likely participate in the assembly of a previously characterized annelid-specific giant hemoglobin. Extracellular globin mRNAs are absent in smaller juveniles, accumulate considerably in growing and more active worms and peak in swarming adults, as the need for O culminates. Next, we conducted a metazoan-wide phylogenetic analysis of globins using data from complete genomes. We establish that five globin genes (stem globins) were present in the last common ancestor of bilaterians. Based on these results, we propose a new nomenclature of globins, with five clades. All five ancestral stem-globin clades are retained in some spiralians, while some clades disappeared early in deuterostome and ecdysozoan evolution. All known bilaterian blood globin families are grouped in a single clade (clade I) together with intracellular globins of bilaterians devoid of red blood.
We uncover a complex "pre-blood" evolution of globins, with an early gene radiation in ancestral bilaterians. Circulating hemoglobins in various bilaterian groups evolved convergently, presumably in correlation with animal size and activity. However, all hemoglobins derive from a clade I globin, or cytoglobin, probably involved in intracellular O transit and regulation. The annelid Platynereis is remarkable in having a large family of extracellular blood globins, while retaining all clades of ancestral bilaterian globins.
血管系统及其呼吸色素的进化方式仍存在争议。虽然许多动物都有血管系统,但血红蛋白作为血液色素仅存在于少数几个群体(脊椎动物、环节动物、一些节肢动物和软体动物物种)中。血红蛋白由球蛋白亚基组成,属于多基因家族,以各种多聚体形式存在。目前还不清楚来自不同两侧对称动物群体的血红蛋白家族是否有共同的起源。
为了揭示两侧对称动物中的球蛋白进化,我们研究了海洋环节动物扁形虫 Platynereis dumerilii,这是一种基因组进化缓慢的物种。扁形虫表现出一种封闭的血管系统,其中充满了细胞外血红蛋白。扁形虫基因组和转录组揭示了一个由 19 个球蛋白组成的家族,其中 9 个被预测为细胞外球蛋白。细胞外球蛋白由蠕虫分段附肢血管衬里的专门细胞产生,作为鳃,因此可能参与了先前描述的环节动物特异性巨型血红蛋白的组装。在较小的幼体中不存在细胞外球蛋白 mRNA,在生长和更活跃的蠕虫中大量积累,并在聚集的成虫中达到峰值,因为对 O 的需求达到顶峰。接下来,我们使用来自完整基因组的数据对球蛋白进行了广泛的后生动物系统发育分析。我们确定在两侧对称动物的最后共同祖先中存在 5 个球蛋白基因(主干球蛋白)。基于这些结果,我们提出了一种新的球蛋白命名法,有五个分支。所有五个主干球蛋白的祖先进化分支都保留在一些螺旋动物中,而一些分支在后口动物和节肢动物的早期进化中消失了。所有已知的两侧对称动物血液球蛋白家族都与缺乏红细胞的两侧对称动物的细胞内球蛋白一起被归为一个单独的分支(分支 I)。
我们揭示了球蛋白在早期两侧对称动物中复杂的“前血液”进化。各种两侧对称动物群体中的循环血红蛋白是趋同进化的,可能与动物的大小和活动有关。然而,所有的血红蛋白都来自于分支 I 球蛋白或细胞色素 b,可能参与细胞内 O 的转运和调节。环节动物扁形虫具有庞大的细胞外血液球蛋白家族,同时保留了所有主干球蛋白的分支,这是非常显著的。