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循环 tRNA 片段作为一种新型生物标志物类别,可用于区分急性脑卒中亚型。

Circulating tRNA Fragments as a Novel Biomarker Class to Distinguish Acute Stroke Subtypes.

机构信息

Department of Neurology, Leiden University Medical Center, 2300 RC Leiden, The Netherlands.

Department of Vascular Surgery, Leiden University Medical Center, 2300 RC Leiden, The Netherlands.

出版信息

Int J Mol Sci. 2020 Dec 24;22(1):135. doi: 10.3390/ijms22010135.

Abstract

Early blood biomarkers to diagnose acute stroke could drastically reduce treatment delays. We investigated whether circulating small non-coding RNAs can serve as biomarkers to distinguish between acute ischemic stroke (IS), intracerebral hemorrhage (ICH) and stroke mimics (SM). In an ongoing observational cohort study, we performed small RNA-sequencing in plasma obtained from a discovery cohort of 26 patients (9 IS, 8 ICH and 9 SM) presented to the emergency department within 6 h of symptom onset. We validated our results in an independent dataset of 20 IS patients and 20 healthy controls. ICH plasma had the highest abundance of ribosomal and tRNA-derived fragments, while microRNAs were most abundant in plasma of IS patients. Combinations of four to five tRNAs yielded diagnostic accuracies (areas under the receiver operating characteristics curve) up to 0.986 (ICH vs. IS and SM) in the discovery cohort. Validation of the IS and SM models in the independent dataset yielded diagnostic accuracies of 0.870 and 0.885 to distinguish IS from healthy controls. Thus, we identified tRNA-derived fragments as a promising novel class of biomarkers to distinguish between acute IS, ICH and SM, as well as healthy controls.

摘要

早期血液生物标志物可大大缩短急性脑卒中的诊断时间。我们研究了循环小非编码 RNA 是否可以作为生物标志物,用于区分急性缺血性脑卒中 (IS)、脑出血 (ICH) 和脑卒中模拟症 (SM)。在一项正在进行的观察性队列研究中,我们对发病 6 小时内到急诊科就诊的 26 名患者(9 名 IS、8 名 ICH 和 9 名 SM)的血浆进行了小 RNA 测序。我们在一个独立的 20 名 IS 患者和 20 名健康对照组的数据集上验证了我们的结果。ICH 血浆中核糖体和 tRNA 衍生片段的丰度最高,而 IS 患者血浆中 microRNAs 最丰富。在发现队列中,四到五个 tRNA 的组合可达到高达 0.986 的诊断准确性(ICH 与 IS 和 SM 相比)。在独立数据集上验证 IS 和 SM 模型的结果表明,区分 IS 与健康对照组的诊断准确性分别为 0.870 和 0.885。因此,我们确定 tRNA 衍生片段是一种有前途的新型生物标志物,可用于区分急性 IS、ICH 和 SM 以及健康对照组。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d11f/7796003/c886732c58dd/ijms-22-00135-g001.jpg

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