Physics Department, King's College London, Strand, London WC2R 2LS, United Kingdom.
Biointerphases. 2021 Jan 4;15(6):061018. doi: 10.1116/6.0000561.
Pentameric ligand-gated ion channels (pLGICs), embedded in the lipid membranes of nerve cells, mediate fast synaptic transmission and are major pharmaceutical targets. Because of their complexity and the limited knowledge of their structure, their working mechanisms have still to be fully unraveled at the molecular level. Over the past few years, evidence that the lipid membrane may modulate the function of membrane proteins, including pLGICs, has emerged. Here, we investigate, by means of molecular dynamics simulations, the behavior of the lipid membrane at the interface with the 5-HT receptor (5-HTR), a representative pLGIC which is the target of nausea-suppressant drugs, in a nonconductive state. Three lipid compositions are studied, spanning different concentrations of the phospholipids, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine and 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine, and of cholesterol, hence a range of viscosities. A variety of lipid interactions and persistent binding events to different parts of the receptor are revealed in the investigated models, providing snapshots of the dynamical environment at the membrane-receptor interface. Some of these events result in lipid intercalation within the transmembrane domain, and others reach out to protein key sections for signal transmission and receptor activation, such as the Cys-loop and the M2-M3 loop. In particular, phospholipids, with their long hydrophobic tails, play an important role in these interactions, potentially providing a bridge between these two structures. A higher cholesterol content appears to promote lipid persistent binding to the receptor.
五聚体配体门控离子通道(pLGICs)嵌入神经细胞的脂质膜中,介导快速突触传递,是主要的药物靶点。由于其复杂性和结构知识的有限性,其工作机制在分子水平上仍有待完全阐明。近年来,有证据表明,脂质膜可能调节包括 pLGIC 在内的膜蛋白的功能。在这里,我们通过分子动力学模拟研究了在非导电状态下,脂质膜与 5-羟色胺受体(5-HTR)相互作用的行为,5-HTR 是一种代表性的 pLGIC,也是止吐药物的靶点。研究了三种脂质组成,涵盖了不同浓度的磷脂 1-棕榈酰-2-油酰-sn-甘油-3-磷酸胆碱和 1-棕榈酰-2-油酰-sn-甘油-3-磷酸乙醇胺,以及胆固醇,因此有不同的粘度范围。在所研究的模型中揭示了多种脂质相互作用和与受体不同部分的持久结合事件,提供了在膜-受体界面处动态环境的快照。这些事件中的一些导致跨膜域内的脂质插入,而另一些则延伸到用于信号传递和受体激活的蛋白质关键部分,如 Cys 环和 M2-M3 环。特别是,具有长疏水尾巴的磷脂在这些相互作用中起着重要作用,可能为这两个结构之间提供了桥梁。较高的胆固醇含量似乎促进了脂质与受体的持久结合。