从墨西哥醋栗番茄根（Brot. Ex Horm.）中分离得到的具有生物防治和促进植物生长作用的内生细菌菌株E25的基因组序列草图
Draft Genome Sequence of sp. Strain E25, a Biocontrol and Plant Growth-Promoting Bacterial Endophyte Isolated from Mexican Husk Tomato Roots ( Brot. Ex Horm.).
作者信息
Pérez-Equihua Adrián, Santoyo Gustavo
机构信息
Instituto de Investigaciones Químico Biológicas, Universidad Michoacana de San Nicolás de Hidalgo, Morelia, Michoacán, México.
Instituto de Investigaciones Químico Biológicas, Universidad Michoacana de San Nicolás de Hidalgo, Morelia, Michoacán, México
出版信息
Microbiol Resour Announc. 2021 Jan 7;10(1):e01112-20. doi: 10.1128/MRA.01112-20.
Abstract
sp. strain E25 is an endophytic strain isolated from husk tomato roots in Michoacán, México, that displayed excellent biocontrol and plant growth-promoting activities under normal and salt stress conditions. This draft genome report confirms the presence of genes involved in direct and indirect mechanisms to stimulate plant growth and health.
摘要
sp.菌株E25是从墨西哥米却肯州的酸浆属植物根部分离出的一种内生菌株，在正常和盐胁迫条件下均表现出优异的生物防治和促进植物生长的活性。这份基因组草图报告证实了存在参与刺激植物生长和健康的直接和间接机制的基因。
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本文引用的文献
1
antiSMASH 4.0-improvements in chemistry prediction and gene cluster boundary identification.antiSMASH 4.0——化学预测和基因簇边界识别的改进。
Nucleic Acids Res. 2017 Jul 3;45(W1):W36-W41. doi: 10.1093/nar/gkx319.
2
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
3
Plant growth-promoting bacterial endophytes.促进植物生长的内生细菌
Microbiol Res. 2016 Feb;183:92-9. doi: 10.1016/j.micres.2015.11.008. Epub 2015 Nov 25.
4
Trimmomatic: a flexible trimmer for Illumina sequence data.Trimmomatic：一款适用于 Illumina 测序数据的灵活修剪工具。
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
5
A bioinformatics approach to the determination of genes involved in endophytic behavior in Burkholderia spp.一种生物信息学方法，用于确定伯克霍尔德氏菌属中与内生行为相关的基因。
J Theor Biol. 2014 Feb 21;343:193-8. doi: 10.1016/j.jtbi.2013.10.007.
6
Plant growth-promoting bacteria: mechanisms and applications.植物促生细菌：作用机制与应用
Scientifica (Cairo). 2012;2012:963401. doi: 10.6064/2012/963401. Epub 2012 Sep 19.
7
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes：一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
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