Qu Hui, Zhao Hui, Zhang Xi, Liu Yang, Li Feng, Sun Liyan, Song Zewen
Department of Plastic Surgery, Shanxi Bethune Hospital, Shanxi Academy of Medical Sciences, Taiyuan, China.
Department of Urology, The Affiliated Hospital of Weifang Medical University, Weifang, China.
Front Immunol. 2020 Dec 23;11:612784. doi: 10.3389/fimmu.2020.612784. eCollection 2020.
The ETS family modulates immune response and drug efficiency to targeted therapies, but their role in melanoma is largely unclear. In this study, the ETS family was systematically analyzed in multiple public data sets. Bioinformatics tools were used to characterize the function of ETV7 in melanoma. A prognostic model was constructed using the LASSO Cox regression method. We found that ETV7 was the only differentially expressed gene with significant prognostic relevance in melanoma. Enrichment analysis of seven independent data sets indicated ETV7 participation in various immune-related pathways. ETV7 particularly showed a strong positive correlation with CD8+ T cell infiltration. The prognostic model based on ETV7 and its hub genes showed a relatively good predictive value in training and testing data sets. Thus, ETV7 can potentially regulate the immune microenvironment in melanoma.
ETS家族调节免疫反应和针对靶向治疗的药物疗效,但其在黑色素瘤中的作用尚不清楚。在本研究中,我们在多个公共数据集中对ETS家族进行了系统分析。使用生物信息学工具来表征ETV7在黑色素瘤中的功能。采用LASSO Cox回归方法构建了一个预后模型。我们发现ETV7是黑色素瘤中唯一具有显著预后相关性的差异表达基因。对七个独立数据集的富集分析表明ETV7参与了各种免疫相关途径。ETV7尤其与CD8+ T细胞浸润呈强正相关。基于ETV7及其枢纽基因的预后模型在训练和测试数据集中显示出相对较好的预测价值。因此,ETV7可能在黑色素瘤中调节免疫微环境。