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一种机械模型可以解释真菌激发子角鲨烯和角鲨烯的生物效率的不同。

A mechanistic model may explain the dissimilar biological efficiency of the fungal elicitors cerato-platanin and cerato-populin.

机构信息

Department of Medicine and Surgery, University of Parma, Parma, Italy.

Department of Biomedical Experimental and Clinical Sciences, University of Florence, Firenze, Italy.

出版信息

Biochim Biophys Acta Gen Subj. 2021 May;1865(5):129843. doi: 10.1016/j.bbagen.2021.129843. Epub 2021 Jan 11.

Abstract

Among their various functions, the members of the cerato-platanin family can stimulate plants' defense responses and induce resistance against microbial pathogens. Recent results suggest that conserved loops, also involved in chitin binding, might be a structural motif central for their eliciting activity. Here, we focus on cerato-platanin and its orthologous cerato-populin, searching for a rationale of their diverse efficiency to elicit plants' defense and to interact with oligosaccharides. A 3D model of cerato-populin has been generated by homology modeling using the NMR-derived cerato-platanin structure as template, and it has been validated by fitting with residual dipolar couplings. Loops β1-β2 and β2-β3 have been indicated as important for some CPPs members to express their biological function. When compared to cerato-platanin, in cerato-populin they present two mutations and an insertion that significantly modify their electrostatic surface. NMR relaxation experiments point to a reduced conformational plasticity of cerato-populin loops with respect to the ones of cerato-platanin. The different electrostatic surface of the loops combined with a distinct network of intra-molecular interactions are expected to be factors that, by leading to a diverse spatial organization and dissimilar collective motions, can regulate the eliciting efficacy of the two proteins and their affinity for oligosaccharides.

摘要

在其各种功能中,角蛋白酶-平板蛋白酶家族的成员可以刺激植物的防御反应,并诱导对微生物病原体的抗性。最近的结果表明,参与几丁质结合的保守环可能是其激发活性的中心结构基序。在这里,我们专注于角蛋白酶-平板蛋白酶及其同源物角蛋白酶-populin,寻找它们在激发植物防御和与寡糖相互作用方面的不同效率的原理。使用 NMR 衍生的角蛋白酶-平板蛋白酶结构作为模板,通过同源建模生成了角蛋白酶- populin 的 3D 模型,并通过与残差偶极耦合拟合进行了验证。β1-β2 和 β2-β3 环被表明对于一些 CPPs 成员表达其生物学功能很重要。与角蛋白酶-平板蛋白酶相比,在角蛋白酶- populin 中,它们存在两个突变和一个插入,这显著改变了它们的静电表面。NMR 弛豫实验表明,角蛋白酶- populin 环的构象灵活性相对于角蛋白酶-平板蛋白酶的环降低。环的不同静电表面加上独特的分子内相互作用网络,预计是导致两种蛋白质空间组织不同和集体运动不同的因素,从而调节两种蛋白质的激发效率及其与寡糖的亲和力。

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