Department of Medicine and Surgery, University of Parma, Parma, Italy.
Department of Biomedical Experimental and Clinical Sciences, University of Florence, Firenze, Italy.
Biochim Biophys Acta Gen Subj. 2021 May;1865(5):129843. doi: 10.1016/j.bbagen.2021.129843. Epub 2021 Jan 11.
Among their various functions, the members of the cerato-platanin family can stimulate plants' defense responses and induce resistance against microbial pathogens. Recent results suggest that conserved loops, also involved in chitin binding, might be a structural motif central for their eliciting activity. Here, we focus on cerato-platanin and its orthologous cerato-populin, searching for a rationale of their diverse efficiency to elicit plants' defense and to interact with oligosaccharides. A 3D model of cerato-populin has been generated by homology modeling using the NMR-derived cerato-platanin structure as template, and it has been validated by fitting with residual dipolar couplings. Loops β1-β2 and β2-β3 have been indicated as important for some CPPs members to express their biological function. When compared to cerato-platanin, in cerato-populin they present two mutations and an insertion that significantly modify their electrostatic surface. NMR relaxation experiments point to a reduced conformational plasticity of cerato-populin loops with respect to the ones of cerato-platanin. The different electrostatic surface of the loops combined with a distinct network of intra-molecular interactions are expected to be factors that, by leading to a diverse spatial organization and dissimilar collective motions, can regulate the eliciting efficacy of the two proteins and their affinity for oligosaccharides.
在其各种功能中,角蛋白酶-平板蛋白酶家族的成员可以刺激植物的防御反应,并诱导对微生物病原体的抗性。最近的结果表明,参与几丁质结合的保守环可能是其激发活性的中心结构基序。在这里,我们专注于角蛋白酶-平板蛋白酶及其同源物角蛋白酶-populin,寻找它们在激发植物防御和与寡糖相互作用方面的不同效率的原理。使用 NMR 衍生的角蛋白酶-平板蛋白酶结构作为模板,通过同源建模生成了角蛋白酶- populin 的 3D 模型,并通过与残差偶极耦合拟合进行了验证。β1-β2 和 β2-β3 环被表明对于一些 CPPs 成员表达其生物学功能很重要。与角蛋白酶-平板蛋白酶相比,在角蛋白酶- populin 中,它们存在两个突变和一个插入,这显著改变了它们的静电表面。NMR 弛豫实验表明,角蛋白酶- populin 环的构象灵活性相对于角蛋白酶-平板蛋白酶的环降低。环的不同静电表面加上独特的分子内相互作用网络,预计是导致两种蛋白质空间组织不同和集体运动不同的因素,从而调节两种蛋白质的激发效率及其与寡糖的亲和力。