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鉴定 ACV 合成酶第一个模块保守的 N 端结构域。

Identification of a conserved N-terminal domain in the first module of ACV synthetases.

机构信息

Molecular Microbiology, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Groningen, The Netherlands.

Synthetic Biology and Cell Engineering, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Groningen, The Netherlands.

出版信息

Microbiologyopen. 2021 Jan;10(1):e1145. doi: 10.1002/mbo3.1145. Epub 2021 Jan 15.

Abstract

The l-δ-(α-aminoadipoyl)-l-cysteinyl-d-valine synthetase (ACVS) is a trimodular nonribosomal peptide synthetase (NRPS) that provides the peptide precursor for the synthesis of β-lactams. The enzyme has been extensively characterized in terms of tripeptide formation and substrate specificity. The first module is highly specific and is the only NRPS unit known to recruit and activate the substrate l-α-aminoadipic acid, which is coupled to the α-amino group of l-cysteine through an unusual peptide bond, involving its δ-carboxyl group. Here we carried out an in-depth investigation on the architecture of the first module of the ACVS enzymes from the fungus Penicillium rubens and the bacterium Nocardia lactamdurans. Bioinformatic analyses revealed the presence of a previously unidentified domain at the N-terminus which is structurally related to condensation domains, but smaller in size. Deletion variants of both enzymes were generated to investigate the potential impact on penicillin biosynthesis in vivo and in vitro. The data indicate that the N-terminal domain is important for catalysis.

摘要

l-δ-(α-氨基己二酰基)-l-半胱氨酸-d-缬氨酸合成酶(ACVS)是一种三模块非核糖体肽合成酶(NRPS),为β-内酰胺的合成提供肽前体。该酶在三肽形成和底物特异性方面已得到广泛研究。第一个模块具有高度特异性,是已知唯一能够招募和激活底物 l-α-氨基己二酸的 NRPS 单元,该底物通过不寻常的肽键与 l-半胱氨酸的α-氨基偶联,涉及其 δ-羧基。在这里,我们对来自真菌红色青霉和细菌乳酰内酰胺放线菌的 ACVS 酶的第一个模块的结构进行了深入研究。生物信息学分析表明,在 N 端存在一个以前未识别的结构域,该结构域与缩合结构域结构相关,但体积较小。生成了两种酶的缺失变体,以研究其对体内和体外青霉素生物合成的潜在影响。数据表明,N 端结构域对催化很重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ac9/7884236/a2edccf9c835/MBO3-10-e1145-g001.jpg

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